Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A6P48664 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC1A6P48664 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 RCN1P2-201ENST00000398357 915 ntBASIC16.48■□□□□ 0.23
SLC1A6P48664 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC1A6P48664 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.48■□□□□ 0.23
SLC1A6P48664 BX276092.5-203ENST00000456199 560 ntBASIC16.48■□□□□ 0.23
SLC1A6P48664 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A6P48664 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A6P48664 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SLC1A6P48664 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A6P48664 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 SNX33P1-201ENST00000592116 1762 ntBASIC16.48■□□□□ 0.23
SLC1A6P48664 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.48■□□□□ 0.23
SLC1A6P48664 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.48■□□□□ 0.23
SLC1A6P48664 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.48■□□□□ 0.23
SLC1A6P48664 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SLC1A6P48664 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SLC1A6P48664 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 AL513477.1-201ENST00000602865 2407 ntBASIC16.47■□□□□ 0.23
SLC1A6P48664 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A6P48664 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A6P48664 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A6P48664 MINOS1P3-201ENST00000457048 203 ntBASIC16.47■□□□□ 0.23
SLC1A6P48664 AC096582.2-201ENST00000510860 516 ntBASIC16.47■□□□□ 0.23
SLC1A6P48664 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A6P48664 LINC01238-205ENST00000567549 1107 ntBASIC16.47■□□□□ 0.23
SLC1A6P48664 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A6P48664 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.47■□□□□ 0.23
SLC1A6P48664 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A6P48664 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.47■□□□□ 0.23
SLC1A6P48664 AL121672.3-201ENST00000608644 468 ntBASIC16.47■□□□□ 0.23
SLC1A6P48664 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A6P48664 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A6P48664 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 AC233702.3-201ENST00000578656 1387 ntBASIC16.47■□□□□ 0.23
SLC1A6P48664 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SLC1A6P48664 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.47■□□□□ 0.23
SLC1A6P48664 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SLC1A6P48664 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 AL590787.1-201ENST00000568856 1315 ntBASIC16.46■□□□□ 0.23
SLC1A6P48664 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 SIGLEC16-201ENST00000599858 1437 ntBASIC16.46■□□□□ 0.23
SLC1A6P48664 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC1A6P48664 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC1A6P48664 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC1A6P48664 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC1A6P48664 AL512652.2-201ENST00000625156 1716 ntBASIC16.46■□□□□ 0.23
SLC1A6P48664 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms