Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
NR4A2P43354 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.27■□□□□ 0.04
NR4A2P43354 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
NR4A2P43354 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.27■□□□□ 0.04
NR4A2P43354 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NR4A2P43354 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.27■□□□□ 0.04
NR4A2P43354 NUS1P2-201ENST00000417358 873 ntBASIC15.27■□□□□ 0.04
NR4A2P43354 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.27■□□□□ 0.04
NR4A2P43354 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.27■□□□□ 0.04
NR4A2P43354 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.27■□□□□ 0.04
NR4A2P43354 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.27■□□□□ 0.04
NR4A2P43354 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.27■□□□□ 0.04
NR4A2P43354 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 AL662844.1-201ENST00000546340 181 ntBASIC15.27■□□□□ 0.04
NR4A2P43354 AP005901.3-202ENST00000581653 237 ntBASIC15.27■□□□□ 0.04
NR4A2P43354 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.27■□□□□ 0.04
NR4A2P43354 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NR4A2P43354 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A2P43354 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A2P43354 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A2P43354 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
NR4A2P43354 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
NR4A2P43354 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A2P43354 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.27■□□□□ 0.03
NR4A2P43354 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A2P43354 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A2P43354 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A2P43354 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A2P43354 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.27■□□□□ 0.03
NR4A2P43354 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NR4A2P43354 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NR4A2P43354 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A2P43354 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A2P43354 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.26■□□□□ 0.03
NR4A2P43354 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NR4A2P43354 AP000347.1-202ENST00000435868 847 ntBASIC15.26■□□□□ 0.03
NR4A2P43354 AC106795.1-205ENST00000512851 1056 ntBASIC15.26■□□□□ 0.03
NR4A2P43354 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.26■□□□□ 0.03
NR4A2P43354 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.26■□□□□ 0.03
NR4A2P43354 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.26■□□□□ 0.03
NR4A2P43354 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.26■□□□□ 0.03
NR4A2P43354 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NR4A2P43354 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.26■□□□□ 0.03
NR4A2P43354 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NR4A2P43354 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NR4A2P43354 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
NR4A2P43354 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A2P43354 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NR4A2P43354 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.26■□□□□ 0.03
NR4A2P43354 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NR4A2P43354 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NR4A2P43354 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.25■□□□□ 0.03
NR4A2P43354 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NR4A2P43354 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NR4A2P43354 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.25■□□□□ 0.03
NR4A2P43354 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.25■□□□□ 0.03
NR4A2P43354 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 AL365203.3-201ENST00000609742 2057 ntBASIC15.25■□□□□ 0.03
NR4A2P43354 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NR4A2P43354 POM121L3P-201ENST00000419331 1163 ntBASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms