Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SSR1P43307 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SSR1P43307 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.85■□□□□ 0.45
SSR1P43307 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.85■□□□□ 0.45
SSR1P43307 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.85■□□□□ 0.45
SSR1P43307 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.85■□□□□ 0.45
SSR1P43307 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.85■□□□□ 0.45
SSR1P43307 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.85■□□□□ 0.45
SSR1P43307 AC008608.2-201ENST00000606089 416 ntBASIC17.85■□□□□ 0.45
SSR1P43307 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SSR1P43307 AL139288.1-201ENST00000623748 933 ntBASIC17.85■□□□□ 0.45
SSR1P43307 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SSR1P43307 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SSR1P43307 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
SSR1P43307 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
SSR1P43307 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SSR1P43307 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SSR1P43307 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.84■□□□□ 0.45
SSR1P43307 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.84■□□□□ 0.45
SSR1P43307 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SSR1P43307 AC243591.1-201ENST00000452967 1364 ntBASIC17.84■□□□□ 0.45
SSR1P43307 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 AP002490.2-201ENST00000524791 560 ntBASIC17.84■□□□□ 0.45
SSR1P43307 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.84■□□□□ 0.45
SSR1P43307 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.84■□□□□ 0.45
SSR1P43307 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SSR1P43307 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
SSR1P43307 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
SSR1P43307 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
SSR1P43307 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSR1P43307 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.83■□□□□ 0.45
SSR1P43307 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSR1P43307 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.83■□□□□ 0.45
SSR1P43307 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSR1P43307 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSR1P43307 AL645728.1-201ENST00000366221 2101 ntBASIC17.83■□□□□ 0.45
SSR1P43307 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSR1P43307 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SSR1P43307 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
SSR1P43307 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 AL590787.1-201ENST00000568856 1315 ntBASIC17.83■□□□□ 0.44
SSR1P43307 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
SSR1P43307 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.83■□□□□ 0.44
SSR1P43307 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.83■□□□□ 0.44
SSR1P43307 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.83■□□□□ 0.44
SSR1P43307 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.83■□□□□ 0.44
SSR1P43307 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.83■□□□□ 0.44
SSR1P43307 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 AL353135.1-201ENST00000606729 504 ntBASIC17.83■□□□□ 0.44
SSR1P43307 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
SSR1P43307 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SSR1P43307 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SSR1P43307 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
SSR1P43307 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms