Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PDE6BP35913 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
PDE6BP35913 VMO1-203ENST00000416307 712 ntTSL 2 BASIC20.39■□□□□ 0.85
PDE6BP35913 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.39■□□□□ 0.85
PDE6BP35913 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.39■□□□□ 0.85
PDE6BP35913 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PDE6BP35913 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC20.39■□□□□ 0.85
PDE6BP35913 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.39■□□□□ 0.85
PDE6BP35913 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.39■□□□□ 0.85
PDE6BP35913 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6BP35913 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
PDE6BP35913 IMPDH1P4-201ENST00000445028 1534 ntBASIC20.38■□□□□ 0.85
PDE6BP35913 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6BP35913 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.38■□□□□ 0.85
PDE6BP35913 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.38■□□□□ 0.85
PDE6BP35913 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
PDE6BP35913 AP005482.1-201ENST00000563722 1273 ntBASIC20.38■□□□□ 0.85
PDE6BP35913 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6BP35913 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC20.38■□□□□ 0.85
PDE6BP35913 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.38■□□□□ 0.85
PDE6BP35913 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.38■□□□□ 0.85
PDE6BP35913 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6BP35913 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.38■□□□□ 0.85
PDE6BP35913 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6BP35913 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6BP35913 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.38■□□□□ 0.85
PDE6BP35913 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.38■□□□□ 0.85
PDE6BP35913 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.38■□□□□ 0.85
PDE6BP35913 AC020763.4-201ENST00000623414 4170 ntBASIC20.38■□□□□ 0.85
PDE6BP35913 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
PDE6BP35913 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PDE6BP35913 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
PDE6BP35913 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.37■□□□□ 0.85
PDE6BP35913 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC20.37■□□□□ 0.85
PDE6BP35913 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC20.37■□□□□ 0.85
PDE6BP35913 AC234783.1-201ENST00000441761 496 ntBASIC20.37■□□□□ 0.85
PDE6BP35913 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.37■□□□□ 0.85
PDE6BP35913 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC20.37■□□□□ 0.85
PDE6BP35913 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.37■□□□□ 0.85
PDE6BP35913 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC20.37■□□□□ 0.85
PDE6BP35913 AC061975.2-201ENST00000581722 295 ntBASIC20.37■□□□□ 0.85
PDE6BP35913 MIR4259-201ENST00000584466 101 ntBASIC20.37■□□□□ 0.85
PDE6BP35913 AC093726.1-201ENST00000608064 963 ntBASIC20.37■□□□□ 0.85
PDE6BP35913 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC20.37■□□□□ 0.85
PDE6BP35913 MIR6069-201ENST00000620069 79 ntBASIC20.37■□□□□ 0.85
PDE6BP35913 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.37■□□□□ 0.85
PDE6BP35913 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.37■□□□□ 0.85
PDE6BP35913 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.37■□□□□ 0.85
PDE6BP35913 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.37■□□□□ 0.85
PDE6BP35913 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PDE6BP35913 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.36■□□□□ 0.85
PDE6BP35913 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.36■□□□□ 0.85
PDE6BP35913 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC20.36■□□□□ 0.85
PDE6BP35913 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PDE6BP35913 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 AC093724.1-201ENST00000448659 1027 ntBASIC20.36■□□□□ 0.85
PDE6BP35913 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC20.36■□□□□ 0.85
PDE6BP35913 AC007389.4-201ENST00000454674 793 ntBASIC20.36■□□□□ 0.85
PDE6BP35913 NOP2-211ENST00000540228 668 ntTSL 2 BASIC20.36■□□□□ 0.85
PDE6BP35913 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.36■□□□□ 0.85
PDE6BP35913 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PDE6BP35913 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.36■□□□□ 0.85
PDE6BP35913 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PDE6BP35913 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PDE6BP35913 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 LINC02012-201ENST00000608206 1725 ntBASIC20.36■□□□□ 0.85
PDE6BP35913 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PDE6BP35913 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PDE6BP35913 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms