Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 RPS2P28-201ENST00000314255 741 ntBASIC15.97■□□□□ 0.15
KRT20P35900 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC15.97■□□□□ 0.15
KRT20P35900 FAM197Y8-203ENST00000450145 560 ntBASIC15.97■□□□□ 0.15
KRT20P35900 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.97■□□□□ 0.15
KRT20P35900 AC139887.3-201ENST00000568585 713 ntBASIC15.97■□□□□ 0.15
KRT20P35900 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.97■□□□□ 0.15
KRT20P35900 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.97■□□□□ 0.15
KRT20P35900 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.97■□□□□ 0.15
KRT20P35900 AL589182.2-201ENST00000619332 1049 ntBASIC15.97■□□□□ 0.15
KRT20P35900 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
KRT20P35900 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
KRT20P35900 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.97■□□□□ 0.15
KRT20P35900 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.97■□□□□ 0.15
KRT20P35900 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.97■□□□□ 0.15
KRT20P35900 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
KRT20P35900 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
KRT20P35900 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.97■□□□□ 0.15
KRT20P35900 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KRT20P35900 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.96■□□□□ 0.15
KRT20P35900 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.96■□□□□ 0.15
KRT20P35900 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT20P35900 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT20P35900 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
KRT20P35900 AC092053.1-201ENST00000605787 1936 ntBASIC15.96■□□□□ 0.15
KRT20P35900 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC15.96■□□□□ 0.15
KRT20P35900 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT20P35900 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
KRT20P35900 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 AC092068.3-201ENST00000587894 2016 ntBASIC15.96■□□□□ 0.15
KRT20P35900 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.96■□□□□ 0.15
KRT20P35900 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.96■□□□□ 0.15
KRT20P35900 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.96■□□□□ 0.15
KRT20P35900 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC15.96■□□□□ 0.15
KRT20P35900 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
KRT20P35900 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT20P35900 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.96■□□□□ 0.15
KRT20P35900 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.96■□□□□ 0.15
KRT20P35900 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
KRT20P35900 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.96■□□□□ 0.15
KRT20P35900 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.96■□□□□ 0.15
KRT20P35900 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
KRT20P35900 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
KRT20P35900 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 AC093525.9-201ENST00000624961 1746 ntBASIC15.96■□□□□ 0.15
KRT20P35900 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
KRT20P35900 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
KRT20P35900 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.96■□□□□ 0.14
KRT20P35900 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
KRT20P35900 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
KRT20P35900 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT20P35900 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT20P35900 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
KRT20P35900 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.96■□□□□ 0.14
KRT20P35900 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT20P35900 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT20P35900 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT20P35900 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT20P35900 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
KRT20P35900 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT20P35900 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT20P35900 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT20P35900 AC132872.4-202ENST00000622924 2756 ntBASIC15.95■□□□□ 0.14
KRT20P35900 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT20P35900 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.95■□□□□ 0.14
KRT20P35900 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
KRT20P35900 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KRT20P35900 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KRT20P35900 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms