Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CNGA1P29973 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CNGA1P29973 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.97■□□□□ 0.63
CNGA1P29973 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CNGA1P29973 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.96■□□□□ 0.63
CNGA1P29973 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CNGA1P29973 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CNGA1P29973 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.96■□□□□ 0.63
CNGA1P29973 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CNGA1P29973 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.96■□□□□ 0.63
CNGA1P29973 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC18.96■□□□□ 0.63
CNGA1P29973 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.96■□□□□ 0.63
CNGA1P29973 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.96■□□□□ 0.63
CNGA1P29973 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.96■□□□□ 0.63
CNGA1P29973 NME2P1-201ENST00000426182 414 ntBASIC18.96■□□□□ 0.63
CNGA1P29973 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.96■□□□□ 0.63
CNGA1P29973 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.96■□□□□ 0.63
CNGA1P29973 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.96■□□□□ 0.63
CNGA1P29973 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.96■□□□□ 0.63
CNGA1P29973 AL138918.1-201ENST00000568306 659 ntBASIC18.96■□□□□ 0.63
CNGA1P29973 SPDYE22P-201ENST00000582158 798 ntBASIC18.96■□□□□ 0.63
CNGA1P29973 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CNGA1P29973 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CNGA1P29973 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.96■□□□□ 0.63
CNGA1P29973 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.96■□□□□ 0.63
CNGA1P29973 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.96■□□□□ 0.63
CNGA1P29973 AL645608.8-201ENST00000606034 2086 ntBASIC18.96■□□□□ 0.63
CNGA1P29973 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CNGA1P29973 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.95■□□□□ 0.62
CNGA1P29973 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.95■□□□□ 0.62
CNGA1P29973 AC116353.5-201ENST00000638148 1699 ntBASIC18.95■□□□□ 0.62
CNGA1P29973 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.95■□□□□ 0.62
CNGA1P29973 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.95■□□□□ 0.62
CNGA1P29973 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.95■□□□□ 0.62
CNGA1P29973 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.95■□□□□ 0.62
CNGA1P29973 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.95■□□□□ 0.62
CNGA1P29973 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.95■□□□□ 0.62
CNGA1P29973 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.95■□□□□ 0.62
CNGA1P29973 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.95■□□□□ 0.62
CNGA1P29973 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.95■□□□□ 0.62
CNGA1P29973 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CNGA1P29973 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
CNGA1P29973 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CNGA1P29973 AC022144.1-201ENST00000602255 1580 ntBASIC18.94■□□□□ 0.62
CNGA1P29973 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.94■□□□□ 0.62
CNGA1P29973 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.94■□□□□ 0.62
CNGA1P29973 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CNGA1P29973 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 AC108860.2-201ENST00000562760 2183 ntBASIC18.94■□□□□ 0.62
CNGA1P29973 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.94■□□□□ 0.62
CNGA1P29973 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CNGA1P29973 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.94■□□□□ 0.62
CNGA1P29973 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.94■□□□□ 0.62
CNGA1P29973 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.94■□□□□ 0.62
CNGA1P29973 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.94■□□□□ 0.62
CNGA1P29973 AC018529.1-201ENST00000613063 361 ntBASIC18.94■□□□□ 0.62
CNGA1P29973 AP001350.2-201ENST00000625104 1094 ntBASIC18.94■□□□□ 0.62
CNGA1P29973 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CNGA1P29973 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CNGA1P29973 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CNGA1P29973 SLC22A20-204ENST00000530038 1673 ntBASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms