Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VARSP26640 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 RPS2P1-201ENST00000434010 821 ntBASIC16.5■□□□□ 0.23
VARSP26640 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.5■□□□□ 0.23
VARSP26640 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.5■□□□□ 0.23
VARSP26640 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VARSP26640 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.5■□□□□ 0.23
VARSP26640 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.5■□□□□ 0.23
VARSP26640 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
VARSP26640 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.5■□□□□ 0.23
VARSP26640 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.5■□□□□ 0.23
VARSP26640 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.5■□□□□ 0.23
VARSP26640 AC027601.4-201ENST00000611259 610 ntBASIC16.5■□□□□ 0.23
VARSP26640 FAM215A-202ENST00000632077 792 ntBASIC16.5■□□□□ 0.23
VARSP26640 LINC02228-204ENST00000642115 2962 ntBASIC16.5■□□□□ 0.23
VARSP26640 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
VARSP26640 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.5■□□□□ 0.23
VARSP26640 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.5■□□□□ 0.23
VARSP26640 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VARSP26640 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
VARSP26640 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
VARSP26640 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.49■□□□□ 0.23
VARSP26640 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.49■□□□□ 0.23
VARSP26640 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VARSP26640 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.49■□□□□ 0.23
VARSP26640 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.49■□□□□ 0.23
VARSP26640 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
VARSP26640 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.49■□□□□ 0.23
VARSP26640 NABP1-203ENST00000409510 843 ntTSL 5 BASIC16.49■□□□□ 0.23
VARSP26640 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
VARSP26640 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VARSP26640 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.49■□□□□ 0.23
VARSP26640 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.49■□□□□ 0.23
VARSP26640 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.49■□□□□ 0.23
VARSP26640 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.49■□□□□ 0.23
VARSP26640 FAM197Y3-203ENST00000618346 717 ntBASIC16.49■□□□□ 0.23
VARSP26640 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.49■□□□□ 0.23
VARSP26640 AC004706.3-202ENST00000621574 984 ntBASIC16.49■□□□□ 0.23
VARSP26640 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
VARSP26640 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.49■□□□□ 0.23
VARSP26640 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
VARSP26640 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 AC243591.1-201ENST00000452967 1364 ntBASIC16.49■□□□□ 0.23
VARSP26640 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.49■□□□□ 0.23
VARSP26640 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.49■□□□□ 0.23
VARSP26640 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
VARSP26640 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.49■□□□□ 0.23
VARSP26640 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.48■□□□□ 0.23
VARSP26640 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VARSP26640 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
VARSP26640 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.48■□□□□ 0.23
VARSP26640 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.48■□□□□ 0.23
VARSP26640 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
VARSP26640 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.48■□□□□ 0.23
VARSP26640 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.48■□□□□ 0.23
VARSP26640 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.48■□□□□ 0.23
VARSP26640 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms