Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP24386 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
CHMP24386 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CHMP24386 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
CHMP24386 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.7■□□□□ 0.1
CHMP24386 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.69■□□□□ 0.1
CHMP24386 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 FRMD8P1-201ENST00000440433 1524 ntBASIC15.69■□□□□ 0.1
CHMP24386 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CHMP24386 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CHMP24386 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.69■□□□□ 0.1
CHMP24386 AC092364.2-201ENST00000596710 2692 ntBASIC15.69■□□□□ 0.1
CHMP24386 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.69■□□□□ 0.1
CHMP24386 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CHMP24386 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.69■□□□□ 0.1
CHMP24386 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.69■□□□□ 0.1
CHMP24386 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.69■□□□□ 0.1
CHMP24386 AC116407.3-201ENST00000623905 1129 ntBASIC15.69■□□□□ 0.1
CHMP24386 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CHMP24386 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.69■□□□□ 0.1
CHMP24386 PGM5P2-202ENST00000637225 1043 ntBASIC15.69■□□□□ 0.1
CHMP24386 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
CHMP24386 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CHMP24386 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CHMP24386 IL9RP2-201ENST00000423948 1312 ntBASIC15.68■□□□□ 0.1
CHMP24386 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 AC007950.2-201ENST00000615045 2347 ntBASIC15.68■□□□□ 0.1
CHMP24386 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.68■□□□□ 0.1
CHMP24386 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
CHMP24386 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CHMP24386 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
CHMP24386 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CHMP24386 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP24386 HLA-A-202ENST00000376806 1854 ntBASIC15.68■□□□□ 0.1
CHMP24386 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CHMP24386 ACTG1P4-201ENST00000425123 1122 ntBASIC15.68■□□□□ 0.1
CHMP24386 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.68■□□□□ 0.1
CHMP24386 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.68■□□□□ 0.1
CHMP24386 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC15.68■□□□□ 0.1
CHMP24386 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.68■□□□□ 0.1
CHMP24386 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP24386 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CHMP24386 AL049840.3-201ENST00000602669 611 ntBASIC15.68■□□□□ 0.1
CHMP24386 AC004706.3-202ENST00000621574 984 ntBASIC15.68■□□□□ 0.1
CHMP24386 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.68■□□□□ 0.1
CHMP24386 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.68■□□□□ 0.1
CHMP24386 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP24386 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.68■□□□□ 0.1
CHMP24386 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP24386 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CHMP24386 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CHMP24386 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CHMP24386 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.68■□□□□ 0.1
CHMP24386 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CHMP24386 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.67■□□□□ 0.1
CHMP24386 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
CHMP24386 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.67■□□□□ 0.1
CHMP24386 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CHMP24386 AC243591.1-201ENST00000452967 1364 ntBASIC15.67■□□□□ 0.1
CHMP24386 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.67■□□□□ 0.1
CHMP24386 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms