Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 FSCN1P1-201ENST00000568912 1481 ntBASIC12.88□□□□□ -0.35
RAB4AP20338 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 RHBDF1P1-201ENST00000427504 1941 ntBASIC12.88□□□□□ -0.35
RAB4AP20338 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.88□□□□□ -0.35
RAB4AP20338 AC022532.1-201ENST00000624563 1728 ntBASIC12.88□□□□□ -0.35
RAB4AP20338 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.88□□□□□ -0.35
RAB4AP20338 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
RAB4AP20338 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.88□□□□□ -0.35
RAB4AP20338 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAB4AP20338 AC073869.1-201ENST00000415574 2762 ntBASIC12.87□□□□□ -0.35
RAB4AP20338 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAB4AP20338 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAB4AP20338 PEG13-201ENST00000631594 5667 ntBASIC12.87□□□□□ -0.35
RAB4AP20338 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAB4AP20338 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.87□□□□□ -0.35
RAB4AP20338 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RAB4AP20338 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 AC118758.2-201ENST00000614242 2813 ntBASIC12.87□□□□□ -0.35
RAB4AP20338 AC116353.5-201ENST00000638148 1699 ntBASIC12.87□□□□□ -0.35
RAB4AP20338 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC12.87□□□□□ -0.35
RAB4AP20338 CA15P1-201ENST00000481698 905 ntBASIC12.87□□□□□ -0.35
RAB4AP20338 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC12.87□□□□□ -0.35
RAB4AP20338 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC12.87□□□□□ -0.35
RAB4AP20338 MIR4674-201ENST00000582457 87 ntBASIC12.87□□□□□ -0.35
RAB4AP20338 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.87□□□□□ -0.35
RAB4AP20338 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 AC139749.1-202ENST00000617529 3139 ntBASIC12.87□□□□□ -0.35
RAB4AP20338 AC107918.4-201ENST00000641966 3141 ntBASIC12.87□□□□□ -0.35
RAB4AP20338 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
RAB4AP20338 CTBP1-AS2-206ENST00000581398 5652 ntBASIC12.87□□□□□ -0.35
RAB4AP20338 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC12.87□□□□□ -0.35
RAB4AP20338 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RAB4AP20338 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB4AP20338 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB4AP20338 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB4AP20338 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.86□□□□□ -0.35
RAB4AP20338 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RAB4AP20338 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
RAB4AP20338 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RAB4AP20338 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB4AP20338 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC12.86□□□□□ -0.35
RAB4AP20338 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB4AP20338 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
RAB4AP20338 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.86□□□□□ -0.35
RAB4AP20338 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
RAB4AP20338 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RAB4AP20338 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB4AP20338 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RAB4AP20338 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RAB4AP20338 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB4AP20338 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RAB4AP20338 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms