Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 AP005901.3-202ENST00000581653 237 ntBASIC15.85■□□□□ 0.13
NCK1P16333 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
NCK1P16333 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.85■□□□□ 0.13
NCK1P16333 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 AC006277.1-201ENST00000624348 1610 ntBASIC15.85■□□□□ 0.13
NCK1P16333 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 GGT3P-204ENST00000453783 1664 ntBASIC15.85■□□□□ 0.13
NCK1P16333 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
NCK1P16333 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.85■□□□□ 0.13
NCK1P16333 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NCK1P16333 KRT8P49-201ENST00000604166 1432 ntBASIC15.85■□□□□ 0.13
NCK1P16333 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
NCK1P16333 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NCK1P16333 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
NCK1P16333 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.84■□□□□ 0.13
NCK1P16333 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.84■□□□□ 0.13
NCK1P16333 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 AP002414.1-201ENST00000391405 1147 ntBASIC15.84■□□□□ 0.13
NCK1P16333 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NCK1P16333 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.84■□□□□ 0.13
NCK1P16333 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.84■□□□□ 0.13
NCK1P16333 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC15.84■□□□□ 0.13
NCK1P16333 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC15.84■□□□□ 0.13
NCK1P16333 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.84■□□□□ 0.13
NCK1P16333 AC011498.5-201ENST00000592027 486 ntBASIC15.84■□□□□ 0.13
NCK1P16333 AC004817.3-201ENST00000602957 2129 ntBASIC15.84■□□□□ 0.13
NCK1P16333 AC012306.2-201ENST00000609350 630 ntBASIC15.84■□□□□ 0.13
NCK1P16333 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NCK1P16333 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.84■□□□□ 0.13
NCK1P16333 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 AC126177.1-201ENST00000547829 2218 ntBASIC15.84■□□□□ 0.13
NCK1P16333 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.84■□□□□ 0.13
NCK1P16333 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.84■□□□□ 0.13
NCK1P16333 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
NCK1P16333 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 TP73-AS1-210ENST00000637775 1455 ntBASIC15.84■□□□□ 0.13
NCK1P16333 AC097637.2-201ENST00000624096 1997 ntBASIC15.84■□□□□ 0.13
NCK1P16333 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
NCK1P16333 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
NCK1P16333 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
NCK1P16333 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
NCK1P16333 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NCK1P16333 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NCK1P16333 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
NCK1P16333 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.83■□□□□ 0.13
NCK1P16333 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.83■□□□□ 0.13
NCK1P16333 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
NCK1P16333 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
NCK1P16333 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.83■□□□□ 0.12
NCK1P16333 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.83■□□□□ 0.12
NCK1P16333 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.83■□□□□ 0.12
NCK1P16333 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
NCK1P16333 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC15.83■□□□□ 0.12
NCK1P16333 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.83■□□□□ 0.12
NCK1P16333 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
NCK1P16333 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.83■□□□□ 0.12
NCK1P16333 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
NCK1P16333 SIGLEC30P-201ENST00000455569 941 ntBASIC15.83■□□□□ 0.12
NCK1P16333 AL671277.2-201ENST00000458060 996 ntBASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms