Protein–RNA interactions for Protein: P13073

COX4I1, Cytochrome c oxidase subunit 4 isoform 1, mitochondrial, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1P13073 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
COX4I1P13073 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
COX4I1P13073 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.16■□□□□ 0.18
COX4I1P13073 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
COX4I1P13073 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.16■□□□□ 0.18
COX4I1P13073 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.16■□□□□ 0.18
COX4I1P13073 AC145285.6-201ENST00000604632 637 ntBASIC16.16■□□□□ 0.18
COX4I1P13073 HYMAI.1-201ENST00000620949 238 ntBASIC16.16■□□□□ 0.18
COX4I1P13073 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
COX4I1P13073 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
COX4I1P13073 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
COX4I1P13073 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.16■□□□□ 0.18
COX4I1P13073 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 AC099063.4-201ENST00000641099 1602 ntBASIC16.16■□□□□ 0.18
COX4I1P13073 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
COX4I1P13073 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.15■□□□□ 0.18
COX4I1P13073 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
COX4I1P13073 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
COX4I1P13073 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
COX4I1P13073 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.15■□□□□ 0.18
COX4I1P13073 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.15■□□□□ 0.18
COX4I1P13073 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.15■□□□□ 0.18
COX4I1P13073 AC112907.2-201ENST00000448639 330 ntBASIC16.15■□□□□ 0.18
COX4I1P13073 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.15■□□□□ 0.18
COX4I1P13073 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.15■□□□□ 0.18
COX4I1P13073 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.15■□□□□ 0.18
COX4I1P13073 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.15■□□□□ 0.18
COX4I1P13073 AC011840.4-201ENST00000578471 627 ntBASIC16.15■□□□□ 0.18
COX4I1P13073 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
COX4I1P13073 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.15■□□□□ 0.18
COX4I1P13073 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.15■□□□□ 0.18
COX4I1P13073 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC16.15■□□□□ 0.18
COX4I1P13073 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
COX4I1P13073 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
COX4I1P13073 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
COX4I1P13073 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COX4I1P13073 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.14■□□□□ 0.17
COX4I1P13073 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.14■□□□□ 0.17
COX4I1P13073 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
COX4I1P13073 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COX4I1P13073 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.14■□□□□ 0.17
COX4I1P13073 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
COX4I1P13073 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.14■□□□□ 0.17
COX4I1P13073 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
COX4I1P13073 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.14■□□□□ 0.17
COX4I1P13073 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.14■□□□□ 0.17
COX4I1P13073 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 AC009533.2-201ENST00000543664 586 ntBASIC16.14■□□□□ 0.17
COX4I1P13073 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.14■□□□□ 0.17
COX4I1P13073 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.14■□□□□ 0.17
COX4I1P13073 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COX4I1P13073 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.14■□□□□ 0.17
COX4I1P13073 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
COX4I1P13073 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.14■□□□□ 0.17
COX4I1P13073 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.14■□□□□ 0.17
COX4I1P13073 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COX4I1P13073 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.14■□□□□ 0.17
COX4I1P13073 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms