Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 PCDHB19P-201ENST00000570871 2371 ntBASIC15.53■□□□□ 0.08
UBL4AP11441 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 AL122018.1-201ENST00000446607 2310 ntBASIC15.53■□□□□ 0.08
UBL4AP11441 AL031284.1-201ENST00000419297 478 ntBASIC15.53■□□□□ 0.08
UBL4AP11441 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC15.53■□□□□ 0.08
UBL4AP11441 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.53■□□□□ 0.08
UBL4AP11441 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.53■□□□□ 0.08
UBL4AP11441 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC15.53■□□□□ 0.08
UBL4AP11441 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC15.53■□□□□ 0.08
UBL4AP11441 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.53■□□□□ 0.08
UBL4AP11441 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.53■□□□□ 0.08
UBL4AP11441 AC008667.4-201ENST00000607370 168 ntBASIC15.53■□□□□ 0.08
UBL4AP11441 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
UBL4AP11441 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.53■□□□□ 0.08
UBL4AP11441 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.53■□□□□ 0.08
UBL4AP11441 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.53■□□□□ 0.08
UBL4AP11441 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.53■□□□□ 0.08
UBL4AP11441 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.53■□□□□ 0.08
UBL4AP11441 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
UBL4AP11441 RNF216P1-203ENST00000404404 2427 ntBASIC15.53■□□□□ 0.08
UBL4AP11441 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.53■□□□□ 0.08
UBL4AP11441 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
UBL4AP11441 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
UBL4AP11441 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
UBL4AP11441 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 TOP3BP1-201ENST00000420768 1380 ntBASIC15.52■□□□□ 0.08
UBL4AP11441 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.52■□□□□ 0.08
UBL4AP11441 AC002310.6-201ENST00000624451 1377 ntBASIC15.52■□□□□ 0.08
UBL4AP11441 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC15.52■□□□□ 0.08
UBL4AP11441 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.52■□□□□ 0.08
UBL4AP11441 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
UBL4AP11441 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.52■□□□□ 0.08
UBL4AP11441 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
UBL4AP11441 AC093909.1-201ENST00000504731 1122 ntBASIC15.52■□□□□ 0.08
UBL4AP11441 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
UBL4AP11441 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.52■□□□□ 0.08
UBL4AP11441 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.52■□□□□ 0.08
UBL4AP11441 MIR7706-201ENST00000613747 67 ntBASIC15.52■□□□□ 0.08
UBL4AP11441 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.52■□□□□ 0.08
UBL4AP11441 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.52■□□□□ 0.08
UBL4AP11441 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.52■□□□□ 0.08
UBL4AP11441 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
UBL4AP11441 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
UBL4AP11441 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.52■□□□□ 0.07
UBL4AP11441 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
UBL4AP11441 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.52■□□□□ 0.07
UBL4AP11441 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.52■□□□□ 0.07
UBL4AP11441 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
UBL4AP11441 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 AGGF1P2-201ENST00000426656 2106 ntBASIC15.52■□□□□ 0.07
UBL4AP11441 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.52■□□□□ 0.07
UBL4AP11441 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
UBL4AP11441 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBL4AP11441 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
UBL4AP11441 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.51■□□□□ 0.07
UBL4AP11441 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
UBL4AP11441 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
UBL4AP11441 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
UBL4AP11441 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.51■□□□□ 0.07
UBL4AP11441 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
UBL4AP11441 MRPL3P1-201ENST00000400109 1033 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms