Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.61■□□□□ 0.73
TOP1P11387 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TOP1P11387 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.61■□□□□ 0.73
TOP1P11387 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC19.61■□□□□ 0.73
TOP1P11387 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 AL671277.1-201ENST00000429656 993 ntBASIC19.61■□□□□ 0.73
TOP1P11387 URGCP-206ENST00000446958 365 ntTSL 2 BASIC19.61■□□□□ 0.73
TOP1P11387 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.61■□□□□ 0.73
TOP1P11387 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
TOP1P11387 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.61■□□□□ 0.73
TOP1P11387 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC19.61■□□□□ 0.73
TOP1P11387 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.61■□□□□ 0.73
TOP1P11387 AL161645.1-201ENST00000622716 1255 ntBASIC19.61■□□□□ 0.73
TOP1P11387 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TOP1P11387 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TOP1P11387 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.61■□□□□ 0.73
TOP1P11387 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TOP1P11387 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.61■□□□□ 0.73
TOP1P11387 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC19.61■□□□□ 0.73
TOP1P11387 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TOP1P11387 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TOP1P11387 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TOP1P11387 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 SLC9A3P2-201ENST00000447821 2021 ntBASIC19.6■□□□□ 0.73
TOP1P11387 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.6■□□□□ 0.73
TOP1P11387 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 AC092183.1-201ENST00000469884 875 ntBASIC19.6■□□□□ 0.73
TOP1P11387 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC19.6■□□□□ 0.73
TOP1P11387 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.6■□□□□ 0.73
TOP1P11387 FAM86C2P-203ENST00000528684 1004 ntBASIC19.6■□□□□ 0.73
TOP1P11387 SNHG9-202ENST00000564014 471 ntBASIC19.6■□□□□ 0.73
TOP1P11387 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.6■□□□□ 0.73
TOP1P11387 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC19.6■□□□□ 0.73
TOP1P11387 AL513210.1-201ENST00000629608 234 ntBASIC19.6■□□□□ 0.73
TOP1P11387 AC105339.1-204ENST00000636249 355 ntBASIC19.6■□□□□ 0.73
TOP1P11387 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.6■□□□□ 0.73
TOP1P11387 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
TOP1P11387 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.6■□□□□ 0.73
TOP1P11387 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TOP1P11387 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
TOP1P11387 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
TOP1P11387 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.59■□□□□ 0.73
TOP1P11387 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TOP1P11387 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.59■□□□□ 0.73
TOP1P11387 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.59■□□□□ 0.73
TOP1P11387 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.59■□□□□ 0.73
TOP1P11387 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TOP1P11387 CNN2P11-201ENST00000429351 262 ntBASIC19.59■□□□□ 0.73
TOP1P11387 STARD13-205ENST00000439831 945 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms