Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 AP000344.2-201ENST00000512987 629 ntBASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 AC112191.1-201ENST00000523689 701 ntBASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 AL162727.3-201ENST00000635661 2787 ntBASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.19■□□□□ 0.18
CCNYL3P0C7X3 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 PAWRP1-201ENST00000451083 565 ntBASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CCNYL3P0C7X3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 AKR1B10P2-201ENST00000577332 927 ntBASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 AC004835.2-201ENST00000603762 682 ntBASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CCNYL3P0C7X3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms