Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.54■□□□□ 0.4
RB1P06400 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.54■□□□□ 0.4
RB1P06400 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.54■□□□□ 0.4
RB1P06400 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.54■□□□□ 0.4
RB1P06400 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RB1P06400 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RB1P06400 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RB1P06400 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
RB1P06400 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
RB1P06400 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.53■□□□□ 0.4
RB1P06400 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
RB1P06400 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RB1P06400 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RB1P06400 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 AC022210.1-201ENST00000449856 793 ntBASIC17.53■□□□□ 0.4
RB1P06400 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.53■□□□□ 0.4
RB1P06400 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.53■□□□□ 0.4
RB1P06400 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.53■□□□□ 0.4
RB1P06400 AC124947.2-201ENST00000547118 1133 ntBASIC17.53■□□□□ 0.4
RB1P06400 WASH4P-201ENST00000564273 1246 ntBASIC17.53■□□□□ 0.4
RB1P06400 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.53■□□□□ 0.4
RB1P06400 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.53■□□□□ 0.4
RB1P06400 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.53■□□□□ 0.4
RB1P06400 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.53■□□□□ 0.4
RB1P06400 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 SRD5A3P1-201ENST00000603021 949 ntBASIC17.53■□□□□ 0.4
RB1P06400 AC026979.3-201ENST00000607315 403 ntBASIC17.53■□□□□ 0.4
RB1P06400 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.53■□□□□ 0.4
RB1P06400 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 NOC2LP1-202ENST00000452600 2235 ntBASIC17.53■□□□□ 0.4
RB1P06400 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.53■□□□□ 0.4
RB1P06400 AC006277.1-201ENST00000624348 1610 ntBASIC17.53■□□□□ 0.4
RB1P06400 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.53■□□□□ 0.4
RB1P06400 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RB1P06400 KRT8P12-202ENST00000472924 1397 ntBASIC17.53■□□□□ 0.4
RB1P06400 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.52■□□□□ 0.4
RB1P06400 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RB1P06400 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.52■□□□□ 0.4
RB1P06400 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RB1P06400 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RB1P06400 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RB1P06400 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RB1P06400 SPDYE17-201ENST00000412399 783 ntBASIC17.52■□□□□ 0.4
RB1P06400 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RB1P06400 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.52■□□□□ 0.4
RB1P06400 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.52■□□□□ 0.4
RB1P06400 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
RB1P06400 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.52■□□□□ 0.4
RB1P06400 AC004790.1-201ENST00000612686 536 ntBASIC17.52■□□□□ 0.4
RB1P06400 AL033527.5-202ENST00000641632 1098 ntBASIC17.52■□□□□ 0.4
RB1P06400 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RB1P06400 KRT8P39-201ENST00000396270 1433 ntBASIC17.52■□□□□ 0.4
RB1P06400 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.52■□□□□ 0.4
RB1P06400 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.52■□□□□ 0.4
RB1P06400 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RB1P06400 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.52■□□□□ 0.39
RB1P06400 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
RB1P06400 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.52■□□□□ 0.39
RB1P06400 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.52■□□□□ 0.39
RB1P06400 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RB1P06400 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RB1P06400 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
RB1P06400 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
RB1P06400 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RB1P06400 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms