Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOAP06340 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOAP06340 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOAP06340 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.61■□□□□ 0.73
HLA-DOAP06340 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DOAP06340 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.61■□□□□ 0.73
HLA-DOAP06340 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DOAP06340 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.61■□□□□ 0.73
HLA-DOAP06340 AC003101.2-201ENST00000612557 442 ntBASIC19.61■□□□□ 0.73
HLA-DOAP06340 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOAP06340 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOAP06340 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOAP06340 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC19.61■□□□□ 0.73
HLA-DOAP06340 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC19.61■□□□□ 0.73
HLA-DOAP06340 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOAP06340 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HLA-DOAP06340 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOAP06340 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HLA-DOAP06340 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.6■□□□□ 0.73
HLA-DOAP06340 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 SPTSSB-204ENST00000617024 1292 ntBASIC19.6■□□□□ 0.73
HLA-DOAP06340 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 BANP-227ENST00000626016 2144 ntTSL 2 BASIC19.6■□□□□ 0.73
HLA-DOAP06340 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HLA-DOAP06340 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 FZD10-202ENST00000539839 3282 ntBASIC19.59■□□□□ 0.73
HLA-DOAP06340 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 LHX6-205ENST00000464484 666 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 AC097493.3-201ENST00000509725 367 ntBASIC19.59■□□□□ 0.73
HLA-DOAP06340 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 FOXO1B-201ENST00000504678 1527 ntBASIC19.59■□□□□ 0.73
HLA-DOAP06340 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.59■□□□□ 0.73
HLA-DOAP06340 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
HLA-DOAP06340 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOAP06340 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOAP06340 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
HLA-DOAP06340 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOAP06340 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOAP06340 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-DOAP06340 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.58■□□□□ 0.73
HLA-DOAP06340 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOAP06340 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOAP06340 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOAP06340 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.58■□□□□ 0.73
HLA-DOAP06340 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOAP06340 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
HLA-DOAP06340 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
HLA-DOAP06340 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
HLA-DOAP06340 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOAP06340 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOAP06340 AL512638.1-201ENST00000457493 794 ntBASIC19.58■□□□□ 0.72
HLA-DOAP06340 AC007967.4-201ENST00000614700 386 ntBASIC19.58■□□□□ 0.72
HLA-DOAP06340 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOAP06340 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
HLA-DOAP06340 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOAP06340 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOAP06340 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.58■□□□□ 0.72
HLA-DOAP06340 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HLA-DOAP06340 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms