Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 AC092919.2-201ENST00000623631 1645 ntBASIC16.93■□□□□ 0.3
HLA-DQB2P05538 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.93■□□□□ 0.3
HLA-DQB2P05538 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.93■□□□□ 0.3
HLA-DQB2P05538 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 POLD2P1-201ENST00000511220 997 ntBASIC16.93■□□□□ 0.3
HLA-DQB2P05538 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.93■□□□□ 0.3
HLA-DQB2P05538 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 KRT18P58-201ENST00000527480 1120 ntBASIC16.92■□□□□ 0.3
HLA-DQB2P05538 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 PDPK2P-202ENST00000562415 1191 ntBASIC16.92■□□□□ 0.3
HLA-DQB2P05538 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
HLA-DQB2P05538 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.91■□□□□ 0.3
HLA-DQB2P05538 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms