Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PFN2-215ENST00000497148 743 ntTSL 4 BASIC10.22□□□□□ -0.77
APOBP04114 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
APOBP04114 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC10.22□□□□□ -0.77
APOBP04114 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC10.22□□□□□ -0.77
APOBP04114 AC036164.1-201ENST00000570544 333 ntBASIC10.22□□□□□ -0.77
APOBP04114 AC124283.3-201ENST00000570869 594 ntBASIC10.22□□□□□ -0.77
APOBP04114 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC10.22□□□□□ -0.77
APOBP04114 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
APOBP04114 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC10.22□□□□□ -0.77
APOBP04114 KRT8P22-201ENST00000562317 1415 ntBASIC10.22□□□□□ -0.77
APOBP04114 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.22□□□□□ -0.77
APOBP04114 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
APOBP04114 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC10.22□□□□□ -0.77
APOBP04114 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 AL138781.2-201ENST00000617896 1843 ntBASIC10.21□□□□□ -0.77
APOBP04114 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.21□□□□□ -0.77
APOBP04114 REEP1-202ENST00000453231 940 ntTSL 2 BASIC10.21□□□□□ -0.77
APOBP04114 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC10.21□□□□□ -0.77
APOBP04114 RNA5SP410-201ENST00000516285 106 ntBASIC10.21□□□□□ -0.77
APOBP04114 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC10.21□□□□□ -0.77
APOBP04114 RN7SL219P-201ENST00000582872 296 ntBASIC10.21□□□□□ -0.77
APOBP04114 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC10.21□□□□□ -0.77
APOBP04114 ABBA01031660.1-201ENST00000635219 756 ntBASIC10.21□□□□□ -0.77
APOBP04114 AC008687.7-202ENST00000637404 953 ntBASIC10.21□□□□□ -0.77
APOBP04114 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC10.21□□□□□ -0.77
APOBP04114 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
APOBP04114 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
APOBP04114 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
APOBP04114 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
APOBP04114 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 AC104457.1-201ENST00000401024 814 ntBASIC10.21□□□□□ -0.77
APOBP04114 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC10.21□□□□□ -0.77
APOBP04114 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC10.21□□□□□ -0.77
APOBP04114 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 RN7SL560P-201ENST00000577943 264 ntBASIC10.21□□□□□ -0.77
APOBP04114 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC10.21□□□□□ -0.77
APOBP04114 AL136982.4-201ENST00000437689 1740 ntBASIC10.21□□□□□ -0.77
APOBP04114 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC10.21□□□□□ -0.77
APOBP04114 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.77
APOBP04114 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
APOBP04114 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC10.21□□□□□ -0.78
APOBP04114 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 ABALON-201ENST00000629058 1903 ntBASIC10.21□□□□□ -0.78
APOBP04114 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC10.21□□□□□ -0.78
APOBP04114 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC10.21□□□□□ -0.78
APOBP04114 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.21□□□□□ -0.78
APOBP04114 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC10.21□□□□□ -0.78
APOBP04114 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC10.21□□□□□ -0.78
APOBP04114 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC10.21□□□□□ -0.78
APOBP04114 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC10.21□□□□□ -0.78
APOBP04114 AL118558.3-201ENST00000607414 1079 ntBASIC10.21□□□□□ -0.78
APOBP04114 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC10.21□□□□□ -0.78
APOBP04114 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
APOBP04114 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC10.21□□□□□ -0.78
APOBP04114 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC10.21□□□□□ -0.78
APOBP04114 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
APOBP04114 AC093724.1-201ENST00000448659 1027 ntBASIC10.21□□□□□ -0.78
APOBP04114 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC10.21□□□□□ -0.78
APOBP04114 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC10.21□□□□□ -0.78
APOBP04114 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.21□□□□□ -0.78
APOBP04114 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC10.21□□□□□ -0.78
APOBP04114 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
APOBP04114 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
APOBP04114 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 WDR53-204ENST00000433160 887 ntTSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.2□□□□□ -0.78
APOBP04114 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.2□□□□□ -0.78
APOBP04114 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC10.2□□□□□ -0.78
APOBP04114 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC10.2□□□□□ -0.78
APOBP04114 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC10.2□□□□□ -0.78
APOBP04114 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms