Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.91■□□□□ 0.78
COL1A1P02452 AC006538.1-201ENST00000567905 1585 ntBASIC19.91■□□□□ 0.78
COL1A1P02452 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.91■□□□□ 0.78
COL1A1P02452 HLA-V-204ENST00000476601 1289 ntBASIC19.91■□□□□ 0.78
COL1A1P02452 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC19.91■□□□□ 0.78
COL1A1P02452 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 AC004790.1-201ENST00000612686 536 ntBASIC19.91■□□□□ 0.78
COL1A1P02452 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
COL1A1P02452 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC19.91■□□□□ 0.78
COL1A1P02452 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC19.9■□□□□ 0.78
COL1A1P02452 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.9■□□□□ 0.78
COL1A1P02452 NME2P1-201ENST00000426182 414 ntBASIC19.9■□□□□ 0.78
COL1A1P02452 AC009477.1-201ENST00000452936 217 ntBASIC19.9■□□□□ 0.78
COL1A1P02452 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC19.9■□□□□ 0.78
COL1A1P02452 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.9■□□□□ 0.78
COL1A1P02452 AC061975.2-201ENST00000581722 295 ntBASIC19.9■□□□□ 0.78
COL1A1P02452 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC19.9■□□□□ 0.78
COL1A1P02452 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 GGT3P-204ENST00000453783 1664 ntBASIC19.9■□□□□ 0.78
COL1A1P02452 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.9■□□□□ 0.78
COL1A1P02452 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.9■□□□□ 0.78
COL1A1P02452 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.9■□□□□ 0.78
COL1A1P02452 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.9■□□□□ 0.78
COL1A1P02452 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
COL1A1P02452 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
COL1A1P02452 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL1A1P02452 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL1A1P02452 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
COL1A1P02452 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.89■□□□□ 0.77
COL1A1P02452 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A1P02452 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A1P02452 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL1A1P02452 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A1P02452 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.89■□□□□ 0.77
COL1A1P02452 AC098859.1-201ENST00000502915 1238 ntBASIC19.89■□□□□ 0.77
COL1A1P02452 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A1P02452 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A1P02452 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.89■□□□□ 0.77
COL1A1P02452 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.89■□□□□ 0.77
COL1A1P02452 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.89■□□□□ 0.77
COL1A1P02452 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A1P02452 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL1A1P02452 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A1P02452 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A1P02452 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
COL1A1P02452 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
COL1A1P02452 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
COL1A1P02452 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
COL1A1P02452 FZD10-202ENST00000539839 3282 ntBASIC19.89■□□□□ 0.77
COL1A1P02452 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 CU639417.3-201ENST00000624240 1404 ntBASIC19.88■□□□□ 0.77
COL1A1P02452 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COL1A1P02452 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.88■□□□□ 0.77
COL1A1P02452 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
COL1A1P02452 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.88■□□□□ 0.77
COL1A1P02452 AL353705.2-201ENST00000428243 662 ntBASIC19.88■□□□□ 0.77
COL1A1P02452 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.88■□□□□ 0.77
COL1A1P02452 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 AC004233.3-201ENST00000607794 1269 ntBASIC19.88■□□□□ 0.77
COL1A1P02452 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.88■□□□□ 0.77
COL1A1P02452 AC012313.1-201ENST00000593393 3059 ntBASIC19.88■□□□□ 0.77
COL1A1P02452 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
COL1A1P02452 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC19.88■□□□□ 0.77
COL1A1P02452 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.88■□□□□ 0.77
COL1A1P02452 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
COL1A1P02452 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.87■□□□□ 0.77
COL1A1P02452 HNRNPA3P1-201ENST00000401429 1139 ntBASIC19.87■□□□□ 0.77
COL1A1P02452 RPL37AP1-201ENST00000412502 279 ntBASIC19.87■□□□□ 0.77
COL1A1P02452 HNRNPA3P5-201ENST00000455201 833 ntBASIC19.87■□□□□ 0.77
COL1A1P02452 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.87■□□□□ 0.77
COL1A1P02452 AC105021.1-202ENST00000570572 669 ntBASIC19.87■□□□□ 0.77
COL1A1P02452 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.87■□□□□ 0.77
COL1A1P02452 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL1A1P02452 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms