Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 IMP4-203ENST00000409935 958 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 AC040169.1-201ENST00000565382 521 ntBASIC12.92□□□□□ -0.34
TRBV12-3P01733 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 SLC9A3P2-201ENST00000447821 2021 ntBASIC12.91□□□□□ -0.34
TRBV12-3P01733 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 AC074386.1-202ENST00000463561 864 ntBASIC12.91□□□□□ -0.34
TRBV12-3P01733 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.91□□□□□ -0.34
TRBV12-3P01733 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 AC002347.1-201ENST00000569543 541 ntBASIC12.91□□□□□ -0.34
TRBV12-3P01733 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.91□□□□□ -0.34
TRBV12-3P01733 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
TRBV12-3P01733 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
TRBV12-3P01733 AL512652.2-201ENST00000625156 1716 ntBASIC12.91□□□□□ -0.34
TRBV12-3P01733 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
TRBV12-3P01733 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRBV12-3P01733 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.9□□□□□ -0.34
TRBV12-3P01733 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
TRBV12-3P01733 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.9□□□□□ -0.34
TRBV12-3P01733 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
TRBV12-3P01733 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
TRBV12-3P01733 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
TRBV12-3P01733 RNU1-129P-201ENST00000384064 167 ntBASIC12.9□□□□□ -0.34
TRBV12-3P01733 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms