Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.67■□□□□ 0.42
ZBED1O96006 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.67■□□□□ 0.42
ZBED1O96006 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
ZBED1O96006 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ZBED1O96006 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.67■□□□□ 0.42
ZBED1O96006 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.67■□□□□ 0.42
ZBED1O96006 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ZBED1O96006 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.67■□□□□ 0.42
ZBED1O96006 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ZBED1O96006 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.66■□□□□ 0.42
ZBED1O96006 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.66■□□□□ 0.42
ZBED1O96006 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
ZBED1O96006 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.66■□□□□ 0.42
ZBED1O96006 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZBED1O96006 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.66■□□□□ 0.42
ZBED1O96006 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.66■□□□□ 0.42
ZBED1O96006 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 AP002490.2-201ENST00000524791 560 ntBASIC17.66■□□□□ 0.42
ZBED1O96006 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
ZBED1O96006 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.66■□□□□ 0.42
ZBED1O96006 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.66■□□□□ 0.42
ZBED1O96006 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZBED1O96006 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
ZBED1O96006 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
ZBED1O96006 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.66■□□□□ 0.42
ZBED1O96006 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC17.66■□□□□ 0.42
ZBED1O96006 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.66■□□□□ 0.42
ZBED1O96006 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ZBED1O96006 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.66■□□□□ 0.42
ZBED1O96006 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZBED1O96006 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZBED1O96006 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ZBED1O96006 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZBED1O96006 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 AC006277.1-201ENST00000624348 1610 ntBASIC17.65■□□□□ 0.42
ZBED1O96006 LINC00895-201ENST00000629028 1637 ntBASIC17.65■□□□□ 0.42
ZBED1O96006 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.65■□□□□ 0.42
ZBED1O96006 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZBED1O96006 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ZBED1O96006 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 KRT18P13-201ENST00000400056 1290 ntBASIC17.65■□□□□ 0.42
ZBED1O96006 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ZBED1O96006 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.65■□□□□ 0.42
ZBED1O96006 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC17.65■□□□□ 0.42
ZBED1O96006 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.65■□□□□ 0.42
ZBED1O96006 CYP2A7P1-201ENST00000595391 815 ntBASIC17.65■□□□□ 0.42
ZBED1O96006 AC068137.2-201ENST00000605408 478 ntBASIC17.65■□□□□ 0.42
ZBED1O96006 AC013467.2-201ENST00000605472 835 ntBASIC17.65■□□□□ 0.42
ZBED1O96006 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.65■□□□□ 0.42
ZBED1O96006 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZBED1O96006 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 FLJ38576-201ENST00000623820 2459 ntBASIC17.65■□□□□ 0.42
ZBED1O96006 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.65■□□□□ 0.42
ZBED1O96006 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ZBED1O96006 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZBED1O96006 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.65■□□□□ 0.42
ZBED1O96006 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
ZBED1O96006 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms