Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.93■□□□□ 0.46
CSPG5O95196 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CSPG5O95196 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.93■□□□□ 0.46
CSPG5O95196 AC100757.3-201ENST00000622361 1406 ntBASIC17.93■□□□□ 0.46
CSPG5O95196 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.93■□□□□ 0.46
CSPG5O95196 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.93■□□□□ 0.46
CSPG5O95196 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CSPG5O95196 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CSPG5O95196 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.93■□□□□ 0.46
CSPG5O95196 AC004890.2-204ENST00000481968 304 ntBASIC17.93■□□□□ 0.46
CSPG5O95196 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.93■□□□□ 0.46
CSPG5O95196 SPDYE12P-201ENST00000618416 771 ntBASIC17.93■□□□□ 0.46
CSPG5O95196 AC073592.8-201ENST00000624126 511 ntBASIC17.93■□□□□ 0.46
CSPG5O95196 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.93■□□□□ 0.46
CSPG5O95196 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CSPG5O95196 AC008764.6-201ENST00000595909 2069 ntBASIC17.93■□□□□ 0.46
CSPG5O95196 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CSPG5O95196 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.93■□□□□ 0.46
CSPG5O95196 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CSPG5O95196 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
CSPG5O95196 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.93■□□□□ 0.46
CSPG5O95196 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 SLC22A20-204ENST00000530038 1673 ntBASIC17.93■□□□□ 0.46
CSPG5O95196 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CSPG5O95196 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.92■□□□□ 0.46
CSPG5O95196 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.92■□□□□ 0.46
CSPG5O95196 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
CSPG5O95196 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.92■□□□□ 0.46
CSPG5O95196 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.92■□□□□ 0.46
CSPG5O95196 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.92■□□□□ 0.46
CSPG5O95196 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.92■□□□□ 0.46
CSPG5O95196 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.92■□□□□ 0.46
CSPG5O95196 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.92■□□□□ 0.46
CSPG5O95196 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CSPG5O95196 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.92■□□□□ 0.46
CSPG5O95196 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CSPG5O95196 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.92■□□□□ 0.46
CSPG5O95196 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CSPG5O95196 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.92■□□□□ 0.46
CSPG5O95196 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.91■□□□□ 0.46
CSPG5O95196 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.91■□□□□ 0.46
CSPG5O95196 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
CSPG5O95196 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.91■□□□□ 0.46
CSPG5O95196 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.91■□□□□ 0.46
CSPG5O95196 AL353732.1-201ENST00000569618 1459 ntBASIC17.91■□□□□ 0.46
CSPG5O95196 RNU1-129P-201ENST00000384064 167 ntBASIC17.91■□□□□ 0.46
CSPG5O95196 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.91■□□□□ 0.46
CSPG5O95196 NAA50-208ENST00000497255 789 ntTSL 5 BASIC17.91■□□□□ 0.46
CSPG5O95196 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.91■□□□□ 0.46
CSPG5O95196 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.91■□□□□ 0.46
CSPG5O95196 AL596325.1-201ENST00000563991 1082 ntBASIC17.91■□□□□ 0.46
CSPG5O95196 U1.21-201ENST00000580816 167 ntBASIC17.91■□□□□ 0.46
CSPG5O95196 AC027307.3-201ENST00000594262 1100 ntBASIC17.91■□□□□ 0.46
CSPG5O95196 AC008267.7-201ENST00000624570 1194 ntBASIC17.91■□□□□ 0.46
CSPG5O95196 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.91■□□□□ 0.46
CSPG5O95196 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.91■□□□□ 0.46
CSPG5O95196 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CSPG5O95196 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CSPG5O95196 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG5O95196 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG5O95196 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CSPG5O95196 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.9■□□□□ 0.46
CSPG5O95196 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG5O95196 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG5O95196 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CSPG5O95196 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.9■□□□□ 0.46
CSPG5O95196 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.9■□□□□ 0.46
CSPG5O95196 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG5O95196 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CSPG5O95196 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms