Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC21.79■■□□□ 1.08
LTN1O94822 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC21.79■■□□□ 1.08
LTN1O94822 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC21.79■■□□□ 1.08
LTN1O94822 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
LTN1O94822 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC21.79■■□□□ 1.08
LTN1O94822 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.79■■□□□ 1.08
LTN1O94822 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC21.79■■□□□ 1.08
LTN1O94822 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC21.79■■□□□ 1.08
LTN1O94822 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC21.79■■□□□ 1.08
LTN1O94822 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.79■■□□□ 1.08
LTN1O94822 ELK1P1-201ENST00000485699 580 ntBASIC21.79■■□□□ 1.08
LTN1O94822 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LTN1O94822 MIR4321-201ENST00000592276 80 ntBASIC21.79■■□□□ 1.08
LTN1O94822 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.79■■□□□ 1.08
LTN1O94822 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
LTN1O94822 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LTN1O94822 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
LTN1O94822 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC21.79■■□□□ 1.08
LTN1O94822 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC21.79■■□□□ 1.08
LTN1O94822 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.79■■□□□ 1.08
LTN1O94822 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LTN1O94822 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC21.79■■□□□ 1.08
LTN1O94822 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.79■■□□□ 1.08
LTN1O94822 AC025048.3-201ENST00000590609 569 ntBASIC21.79■■□□□ 1.08
LTN1O94822 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC21.79■■□□□ 1.08
LTN1O94822 AC005702.4-201ENST00000618393 416 ntBASIC21.79■■□□□ 1.08
LTN1O94822 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.79■■□□□ 1.08
LTN1O94822 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
LTN1O94822 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 AC120498.9-201ENST00000339021 3867 ntBASIC21.78■■□□□ 1.08
LTN1O94822 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
LTN1O94822 AL645608.8-201ENST00000606034 2086 ntBASIC21.78■■□□□ 1.08
LTN1O94822 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LTN1O94822 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 HLA-A-202ENST00000376806 1854 ntBASIC21.78■■□□□ 1.08
LTN1O94822 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
LTN1O94822 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.78■■□□□ 1.08
LTN1O94822 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 AC098614.1-201ENST00000368528 745 ntBASIC21.78■■□□□ 1.08
LTN1O94822 AZGP1P1-201ENST00000411909 902 ntBASIC21.78■■□□□ 1.08
LTN1O94822 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC21.78■■□□□ 1.08
LTN1O94822 AC123567.1-201ENST00000548294 1261 ntBASIC21.78■■□□□ 1.08
LTN1O94822 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC21.78■■□□□ 1.08
LTN1O94822 CTBP2P3-201ENST00000585629 1255 ntBASIC21.78■■□□□ 1.08
LTN1O94822 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
LTN1O94822 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC21.78■■□□□ 1.08
LTN1O94822 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
LTN1O94822 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
LTN1O94822 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
LTN1O94822 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
LTN1O94822 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.77■■□□□ 1.08
LTN1O94822 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC21.77■■□□□ 1.08
LTN1O94822 GALT-202ENST00000450095 1280 ntTSL 2 BASIC21.77■■□□□ 1.08
LTN1O94822 AC245100.5-201ENST00000452108 331 ntBASIC21.77■■□□□ 1.08
LTN1O94822 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
LTN1O94822 LINC01115-203ENST00000606068 577 ntBASIC21.77■■□□□ 1.08
LTN1O94822 AL365330.1-201ENST00000607459 531 ntBASIC21.77■■□□□ 1.08
LTN1O94822 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
LTN1O94822 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.77■■□□□ 1.08
LTN1O94822 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.77■■□□□ 1.08
LTN1O94822 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
LTN1O94822 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC21.77■■□□□ 1.08
LTN1O94822 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
LTN1O94822 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
LTN1O94822 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LTN1O94822 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
LTN1O94822 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.76■■□□□ 1.07
LTN1O94822 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC21.76■■□□□ 1.07
LTN1O94822 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.76■■□□□ 1.07
LTN1O94822 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
LTN1O94822 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
LTN1O94822 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 AC005915.1-201ENST00000624912 2018 ntBASIC21.76■■□□□ 1.07
LTN1O94822 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LTN1O94822 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms