Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CDKL5O76039 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 GGT4P-201ENST00000623672 1708 ntBASIC19.42■□□□□ 0.7
CDKL5O76039 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.42■□□□□ 0.7
CDKL5O76039 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.42■□□□□ 0.7
CDKL5O76039 IGLL3P-201ENST00000412472 434 ntBASIC19.42■□□□□ 0.7
CDKL5O76039 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CDKL5O76039 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.42■□□□□ 0.7
CDKL5O76039 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDKL5O76039 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC19.42■□□□□ 0.7
CDKL5O76039 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.42■□□□□ 0.7
CDKL5O76039 AC145285.3-201ENST00000564603 959 ntBASIC19.42■□□□□ 0.7
CDKL5O76039 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDKL5O76039 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CDKL5O76039 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.42■□□□□ 0.7
CDKL5O76039 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
CDKL5O76039 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.42■□□□□ 0.7
CDKL5O76039 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDKL5O76039 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDKL5O76039 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CDKL5O76039 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDKL5O76039 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
CDKL5O76039 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDKL5O76039 ALOX12P2-203ENST00000570921 1945 ntBASIC19.41■□□□□ 0.7
CDKL5O76039 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDKL5O76039 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDKL5O76039 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDKL5O76039 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.41■□□□□ 0.7
CDKL5O76039 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.41■□□□□ 0.7
CDKL5O76039 AC096734.2-201ENST00000562054 433 ntBASIC19.41■□□□□ 0.7
CDKL5O76039 AL031432.2-201ENST00000566714 459 ntBASIC19.41■□□□□ 0.7
CDKL5O76039 AL928711.1-201ENST00000570165 459 ntBASIC19.41■□□□□ 0.7
CDKL5O76039 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL5O76039 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.41■□□□□ 0.7
CDKL5O76039 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL5O76039 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.41■□□□□ 0.7
CDKL5O76039 GPAA1P2-202ENST00000606848 1787 ntBASIC19.41■□□□□ 0.7
CDKL5O76039 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDKL5O76039 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDKL5O76039 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDKL5O76039 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDKL5O76039 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CDKL5O76039 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDKL5O76039 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL5O76039 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL5O76039 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL5O76039 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL5O76039 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL5O76039 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL5O76039 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 FDX1P1-201ENST00000449115 551 ntBASIC19.4■□□□□ 0.7
CDKL5O76039 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL5O76039 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL5O76039 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.4■□□□□ 0.7
CDKL5O76039 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.4■□□□□ 0.7
CDKL5O76039 AL121894.2-201ENST00000602977 491 ntBASIC19.4■□□□□ 0.7
CDKL5O76039 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.4■□□□□ 0.7
CDKL5O76039 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDKL5O76039 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDKL5O76039 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDKL5O76039 AC104109.2-201ENST00000602919 1418 ntBASIC19.4■□□□□ 0.7
CDKL5O76039 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms