Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
EXTL3O43909 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.1■□□□□ 0.49
EXTL3O43909 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
EXTL3O43909 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.1■□□□□ 0.49
EXTL3O43909 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC18.1■□□□□ 0.49
EXTL3O43909 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
EXTL3O43909 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
EXTL3O43909 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.1■□□□□ 0.49
EXTL3O43909 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 MKNK2P1-201ENST00000437526 628 ntBASIC18.1■□□□□ 0.49
EXTL3O43909 ALG1L5P-201ENST00000482043 771 ntBASIC18.1■□□□□ 0.49
EXTL3O43909 AC027796.2-201ENST00000575326 344 ntBASIC18.1■□□□□ 0.49
EXTL3O43909 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.1■□□□□ 0.49
EXTL3O43909 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EXTL3O43909 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC18.1■□□□□ 0.49
EXTL3O43909 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
EXTL3O43909 GPAA1P2-202ENST00000606848 1787 ntBASIC18.09■□□□□ 0.49
EXTL3O43909 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
EXTL3O43909 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.09■□□□□ 0.49
EXTL3O43909 GGT3P-204ENST00000453783 1664 ntBASIC18.09■□□□□ 0.49
EXTL3O43909 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
EXTL3O43909 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC18.09■□□□□ 0.49
EXTL3O43909 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
EXTL3O43909 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
EXTL3O43909 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
EXTL3O43909 HTR5BP-201ENST00000430851 1154 ntBASIC18.09■□□□□ 0.49
EXTL3O43909 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.09■□□□□ 0.49
EXTL3O43909 AC004967.1-201ENST00000453589 447 ntBASIC18.09■□□□□ 0.49
EXTL3O43909 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.09■□□□□ 0.49
EXTL3O43909 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
EXTL3O43909 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
EXTL3O43909 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.09■□□□□ 0.49
EXTL3O43909 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.09■□□□□ 0.49
EXTL3O43909 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.09■□□□□ 0.49
EXTL3O43909 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
EXTL3O43909 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.09■□□□□ 0.49
EXTL3O43909 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.09■□□□□ 0.49
EXTL3O43909 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
EXTL3O43909 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EXTL3O43909 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EXTL3O43909 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EXTL3O43909 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EXTL3O43909 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
EXTL3O43909 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.08■□□□□ 0.49
EXTL3O43909 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
EXTL3O43909 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EXTL3O43909 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
EXTL3O43909 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
EXTL3O43909 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.08■□□□□ 0.48
EXTL3O43909 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.08■□□□□ 0.48
EXTL3O43909 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EXTL3O43909 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.08■□□□□ 0.48
EXTL3O43909 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EXTL3O43909 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.08■□□□□ 0.48
EXTL3O43909 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.08■□□□□ 0.48
EXTL3O43909 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.08■□□□□ 0.48
EXTL3O43909 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.08■□□□□ 0.48
EXTL3O43909 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.08■□□□□ 0.48
EXTL3O43909 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
EXTL3O43909 AC005829.1-201ENST00000570002 483 ntBASIC18.08■□□□□ 0.48
EXTL3O43909 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EXTL3O43909 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EXTL3O43909 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EXTL3O43909 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.08■□□□□ 0.48
EXTL3O43909 AC134684.3-201ENST00000641758 218 ntBASIC18.08■□□□□ 0.48
EXTL3O43909 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EXTL3O43909 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
EXTL3O43909 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC18.08■□□□□ 0.48
EXTL3O43909 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EXTL3O43909 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
EXTL3O43909 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
EXTL3O43909 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
EXTL3O43909 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
EXTL3O43909 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
EXTL3O43909 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
EXTL3O43909 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms