Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.7■□□□□ 0.26
LDB2O43679 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB2O43679 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.7■□□□□ 0.26
LDB2O43679 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.7■□□□□ 0.26
LDB2O43679 AC106730.1-201ENST00000566722 1090 ntBASIC16.7■□□□□ 0.26
LDB2O43679 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.7■□□□□ 0.26
LDB2O43679 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.7■□□□□ 0.26
LDB2O43679 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LDB2O43679 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LDB2O43679 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.7■□□□□ 0.26
LDB2O43679 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LDB2O43679 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.69■□□□□ 0.26
LDB2O43679 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
LDB2O43679 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.69■□□□□ 0.26
LDB2O43679 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.69■□□□□ 0.26
LDB2O43679 AC018845.2-201ENST00000568326 409 ntBASIC16.69■□□□□ 0.26
LDB2O43679 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
LDB2O43679 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.69■□□□□ 0.26
LDB2O43679 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.69■□□□□ 0.26
LDB2O43679 PCDH8P1-201ENST00000428983 2773 ntBASIC16.69■□□□□ 0.26
LDB2O43679 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.69■□□□□ 0.26
LDB2O43679 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
LDB2O43679 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.69■□□□□ 0.26
LDB2O43679 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LDB2O43679 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
LDB2O43679 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LDB2O43679 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 ZNF259P1-201ENST00000407656 1365 ntBASIC16.68■□□□□ 0.26
LDB2O43679 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
LDB2O43679 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
LDB2O43679 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.68■□□□□ 0.26
LDB2O43679 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
LDB2O43679 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
LDB2O43679 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.68■□□□□ 0.26
LDB2O43679 MIR3909-201ENST00000579518 119 ntBASIC16.68■□□□□ 0.26
LDB2O43679 AC023141.13-201ENST00000604991 943 ntBASIC16.68■□□□□ 0.26
LDB2O43679 AC004877.2-201ENST00000623941 599 ntBASIC16.68■□□□□ 0.26
LDB2O43679 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
LDB2O43679 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.68■□□□□ 0.26
LDB2O43679 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
LDB2O43679 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.67■□□□□ 0.26
LDB2O43679 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB2O43679 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB2O43679 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.67■□□□□ 0.26
LDB2O43679 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.67■□□□□ 0.26
LDB2O43679 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.67■□□□□ 0.26
LDB2O43679 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.67■□□□□ 0.26
LDB2O43679 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC16.67■□□□□ 0.26
LDB2O43679 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.67■□□□□ 0.26
LDB2O43679 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB2O43679 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
LDB2O43679 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.67■□□□□ 0.26
LDB2O43679 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.67■□□□□ 0.26
LDB2O43679 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
LDB2O43679 AL031055.1-201ENST00000606362 631 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms