Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.84■□□□□ 0.29
SMAD6O43541 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.84■□□□□ 0.29
SMAD6O43541 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 AC109322.1-201ENST00000524499 1264 ntBASIC16.84■□□□□ 0.29
SMAD6O43541 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.84■□□□□ 0.29
SMAD6O43541 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 UXT-AS1-201ENST00000590504 1525 ntBASIC16.84■□□□□ 0.29
SMAD6O43541 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
SMAD6O43541 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.84■□□□□ 0.29
SMAD6O43541 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SMAD6O43541 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SMAD6O43541 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SMAD6O43541 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.84■□□□□ 0.29
SMAD6O43541 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMAD6O43541 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SMAD6O43541 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMAD6O43541 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SMAD6O43541 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SMAD6O43541 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.29
SMAD6O43541 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SMAD6O43541 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 KRT18P34-201ENST00000488218 1270 ntBASIC16.83■□□□□ 0.28
SMAD6O43541 HLA-J-203ENST00000494367 1087 ntBASIC16.83■□□□□ 0.28
SMAD6O43541 IGHV3-62-201ENST00000520057 340 ntBASIC16.83■□□□□ 0.28
SMAD6O43541 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.83■□□□□ 0.28
SMAD6O43541 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SMAD6O43541 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.83■□□□□ 0.28
SMAD6O43541 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.83■□□□□ 0.28
SMAD6O43541 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.83■□□□□ 0.28
SMAD6O43541 AC006538.1-201ENST00000567905 1585 ntBASIC16.83■□□□□ 0.28
SMAD6O43541 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.83■□□□□ 0.28
SMAD6O43541 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.83■□□□□ 0.28
SMAD6O43541 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.83■□□□□ 0.28
SMAD6O43541 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.83■□□□□ 0.28
SMAD6O43541 AC093028.1-201ENST00000622998 982 ntBASIC16.83■□□□□ 0.28
SMAD6O43541 AC009093.7-201ENST00000623853 1223 ntBASIC16.83■□□□□ 0.28
SMAD6O43541 AC008267.7-201ENST00000624570 1194 ntBASIC16.83■□□□□ 0.28
SMAD6O43541 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 AC092171.3-201ENST00000610122 2651 ntBASIC16.83■□□□□ 0.28
SMAD6O43541 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.83■□□□□ 0.28
SMAD6O43541 PCDHA12-202ENST00000613593 2588 ntBASIC16.83■□□□□ 0.28
SMAD6O43541 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SMAD6O43541 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.82■□□□□ 0.28
SMAD6O43541 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SMAD6O43541 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SMAD6O43541 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.82■□□□□ 0.28
SMAD6O43541 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 AC011676.5-201ENST00000624864 2660 ntBASIC16.82■□□□□ 0.28
SMAD6O43541 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 GPS2P2-201ENST00000430745 888 ntBASIC16.82■□□□□ 0.28
SMAD6O43541 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.82■□□□□ 0.28
SMAD6O43541 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.82■□□□□ 0.28
SMAD6O43541 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.82■□□□□ 0.28
SMAD6O43541 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.82■□□□□ 0.28
SMAD6O43541 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.82■□□□□ 0.28
SMAD6O43541 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SMAD6O43541 FLJ38576-201ENST00000623820 2459 ntBASIC16.82■□□□□ 0.28
SMAD6O43541 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.82■□□□□ 0.28
SMAD6O43541 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD6O43541 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SMAD6O43541 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SMAD6O43541 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.82■□□□□ 0.28
SMAD6O43541 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
SMAD6O43541 GGT4P-201ENST00000623672 1708 ntBASIC16.82■□□□□ 0.28
SMAD6O43541 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms