Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 AC060834.1-201ENST00000443027 2032 ntBASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA3F8WFD2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 AC140658.5-201ENST00000438532 169 ntBASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 AC022145.2-201ENST00000598203 171 ntBASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 AL121761.2-201ENST00000598007 1648 ntBASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 AL021920.2-201ENST00000624828 1351 ntBASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPIPA3F8WFD2 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 AC005412.3-201ENST00000580309 715 ntBASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 AC026120.1-201ENST00000611536 926 ntBASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 AC012569.1-201ENST00000591191 1524 ntBASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
NPIPA3F8WFD2 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.21■□□□□ 0.03
NPIPA3F8WFD2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms