Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VGLL3A8MV65 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
VGLL3A8MV65 POM121L4P-202ENST00000427789 1891 ntBASIC16.43■□□□□ 0.22
VGLL3A8MV65 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VGLL3A8MV65 KRT18P55-202ENST00000578578 1546 ntBASIC16.43■□□□□ 0.22
VGLL3A8MV65 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VGLL3A8MV65 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.43■□□□□ 0.22
VGLL3A8MV65 ADAMTS7P1-201ENST00000613213 4793 ntBASIC16.43■□□□□ 0.22
VGLL3A8MV65 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
VGLL3A8MV65 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VGLL3A8MV65 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VGLL3A8MV65 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
VGLL3A8MV65 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
VGLL3A8MV65 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 FTO-214ENST00000636218 2227 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 SRC-202ENST00000373558 4304 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.42■□□□□ 0.22
VGLL3A8MV65 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.42■□□□□ 0.22
VGLL3A8MV65 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
VGLL3A8MV65 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 GRM4-203ENST00000455714 2574 ntTSL 2 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
VGLL3A8MV65 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 AC089987.1-201ENST00000551654 2209 ntBASIC16.41■□□□□ 0.22
VGLL3A8MV65 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.41■□□□□ 0.22
VGLL3A8MV65 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VGLL3A8MV65 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VGLL3A8MV65 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VGLL3A8MV65 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms