Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 RHOA-206ENST00000454011 889 ntTSL 2 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 AC074044.1-201ENST00000609673 707 ntBASIC19.18■□□□□ 0.66
SSC5DA1L4H1 AL139011.1-202ENST00000642063 584 ntBASIC19.18■□□□□ 0.66
SSC5DA1L4H1 CDC14C-201ENST00000428251 1719 ntBASIC19.18■□□□□ 0.66
SSC5DA1L4H1 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSC5DA1L4H1 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 AP005482.1-201ENST00000563722 1273 ntBASIC19.17■□□□□ 0.66
SSC5DA1L4H1 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.17■□□□□ 0.66
SSC5DA1L4H1 AL031731.1-201ENST00000642131 2094 ntBASIC19.17■□□□□ 0.66
SSC5DA1L4H1 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 AC010319.3-201ENST00000597028 470 ntBASIC19.16■□□□□ 0.66
SSC5DA1L4H1 TMEM261P1-201ENST00000604899 340 ntBASIC19.16■□□□□ 0.66
SSC5DA1L4H1 SNX12-206ENST00000622259 661 ntTSL 5 BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSC5DA1L4H1 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 GPAA1P2-202ENST00000606848 1787 ntBASIC19.15■□□□□ 0.66
SSC5DA1L4H1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 RELA-227ENST00000615805 2236 ntTSL 5 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 AC133552.6-201ENST00000613406 534 ntBASIC19.15■□□□□ 0.66
SSC5DA1L4H1 MIR6069-201ENST00000620069 79 ntBASIC19.15■□□□□ 0.66
SSC5DA1L4H1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC5DA1L4H1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms