Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 FGD5P1-202ENST00000614866 2498 ntBASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 KRT87P-202ENST00000534226 1464 ntBASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 AC009102.3-201ENST00000623118 1491 ntBASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 AC087481.3-201ENST00000602886 1894 ntBASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 LINC01230-201ENST00000625222 3017 ntBASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC8.62□□□□□ -1.03
LINC01558Q9Y6Z2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AC091951.1-201ENST00000512854 2465 ntBASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AJ011931.1-201ENST00000618749 2492 ntBASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AL355001.2-201ENST00000620617 1191 ntBASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AC105233.4-201ENST00000642045 216 ntBASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC8.61□□□□□ -1.03
LINC01558Q9Y6Z2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC8.6□□□□□ -1.03
LINC01558Q9Y6Z2 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms