Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.31
TSSC4Q9Y5U2 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
TSSC4Q9Y5U2 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TSSC4Q9Y5U2 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TSSC4Q9Y5U2 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
TSSC4Q9Y5U2 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 AL671277.1-201ENST00000429656 993 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 SPDYE11-202ENST00000450699 704 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 RN7SL589P-201ENST00000481268 310 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 RFPL4AP1-201ENST00000530883 850 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 AC004449.1-201ENST00000564240 433 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 SPDYE9P-201ENST00000570642 692 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 SPDYE10P-202ENST00000612005 668 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 SPDYE8P-202ENST00000612377 668 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 AL161645.1-201ENST00000622716 1255 ntBASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TSSC4Q9Y5U2 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 AC012569.1-201ENST00000591191 1524 ntBASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 EGFEM1P-202ENST00000431685 1563 ntBASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 AL353732.1-201ENST00000569618 1459 ntBASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 AC004461.1-201ENST00000412461 403 ntBASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 HMGN1P19-201ENST00000436976 333 ntBASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 TIMM8BP1-201ENST00000452384 211 ntBASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CYMP-203ENST00000474680 1263 ntBASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TSSC4Q9Y5U2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms