Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AC005412.3-201ENST00000580309 715 ntBASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AL162727.3-201ENST00000635661 2787 ntBASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 AC133963.1-201ENST00000504166 1679 ntBASIC15.67■□□□□ 0.1
PCDHGA9Q9Y5G4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 REXO1L11P-201ENST00000620964 1927 ntBASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 AC055876.3-201ENST00000431496 288 ntBASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 AC138649.4-201ENST00000612222 287 ntBASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 TUBB3P1-201ENST00000405796 1332 ntBASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
PCDHGA9Q9Y5G4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 KLF2P3-201ENST00000451977 1087 ntBASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 KRT8P23-201ENST00000560090 1207 ntBASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PCDHGA9Q9Y5G4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms