Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SCML2Q9UQR0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 PRYP6-201ENST00000514804 343 ntBASIC17.33■□□□□ 0.36
SCML2Q9UQR0 AC109322.1-201ENST00000524499 1264 ntBASIC17.33■□□□□ 0.36
SCML2Q9UQR0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 SLC25A39P2-201ENST00000537614 270 ntBASIC17.33■□□□□ 0.36
SCML2Q9UQR0 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.33■□□□□ 0.36
SCML2Q9UQR0 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 AC004449.1-201ENST00000564240 433 ntBASIC17.32■□□□□ 0.36
SCML2Q9UQR0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 AC093028.1-201ENST00000622998 982 ntBASIC17.32■□□□□ 0.36
SCML2Q9UQR0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 AC073439.1-201ENST00000624121 1774 ntBASIC17.32■□□□□ 0.36
SCML2Q9UQR0 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SCML2Q9UQR0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 AC022211.2-201ENST00000585075 2527 ntBASIC17.31■□□□□ 0.36
SCML2Q9UQR0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.31■□□□□ 0.36
SCML2Q9UQR0 AC142381.1-201ENST00000426099 345 ntBASIC17.31■□□□□ 0.36
SCML2Q9UQR0 AL645939.2-201ENST00000427340 991 ntBASIC17.31■□□□□ 0.36
SCML2Q9UQR0 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms