Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 AC142381.1-201ENST00000426099 345 ntBASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 PCDHA12-202ENST00000613593 2588 ntBASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DENND2AQ9ULE3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 AC011467.4-201ENST00000594891 528 ntBASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 AC008677.1-201ENST00000519230 1561 ntBASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
DENND2AQ9ULE3 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 KLF2P3-201ENST00000451977 1087 ntBASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 DUX4L27-201ENST00000554796 1261 ntBASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 RPS15-212ENST00000593052 629 ntTSL 2 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 AC005498.2-205ENST00000593218 784 ntBASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
DENND2AQ9ULE3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 CD81-202ENST00000381036 880 ntTSL 3 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 SPCS2P1-201ENST00000561636 679 ntBASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.15■□□□□ 0.82
DENND2AQ9ULE3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms