Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 AC135776.1-201ENST00000319817 2481 ntBASIC16.56■□□□□ 0.24
NCDNQ9UBB6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NCDNQ9UBB6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 AC142381.1-201ENST00000426099 345 ntBASIC16.55■□□□□ 0.24
NCDNQ9UBB6 RN7SL837P-201ENST00000463010 287 ntBASIC16.55■□□□□ 0.24
NCDNQ9UBB6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 MIR4259-201ENST00000584466 101 ntBASIC16.55■□□□□ 0.24
NCDNQ9UBB6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NCDNQ9UBB6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 KRT8P44-201ENST00000441609 1350 ntBASIC16.54■□□□□ 0.24
NCDNQ9UBB6 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 AC004945.1-201ENST00000416738 983 ntBASIC16.54■□□□□ 0.24
NCDNQ9UBB6 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 DOC2GP-202ENST00000514950 1163 ntBASIC16.54■□□□□ 0.24
NCDNQ9UBB6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 MIR4538-201ENST00000581377 78 ntBASIC16.54■□□□□ 0.24
NCDNQ9UBB6 CHCHD2P3-201ENST00000603038 451 ntBASIC16.54■□□□□ 0.24
NCDNQ9UBB6 TMEM261P1-201ENST00000604899 340 ntBASIC16.54■□□□□ 0.24
NCDNQ9UBB6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.54■□□□□ 0.24
NCDNQ9UBB6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NCDNQ9UBB6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 AC092933.1-201ENST00000393644 945 ntBASIC16.53■□□□□ 0.24
NCDNQ9UBB6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 MIR3909-201ENST00000579518 119 ntBASIC16.53■□□□□ 0.24
NCDNQ9UBB6 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 MIR6787-201ENST00000616675 61 ntBASIC16.53■□□□□ 0.24
NCDNQ9UBB6 GPR182-203ENST00000622922 591 ntBASIC16.53■□□□□ 0.24
NCDNQ9UBB6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NCDNQ9UBB6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 146.1 ms