Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 GPR89P-201ENST00000407924 1495 ntBASIC14.52□□□□□ -0.08
TREM2Q9NZC2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TREM2Q9NZC2 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TREM2Q9NZC2 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 EGFEM1P-202ENST00000431685 1563 ntBASIC14.51□□□□□ -0.09
TREM2Q9NZC2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 AC023274.1-201ENST00000418278 595 ntBASIC14.51□□□□□ -0.09
TREM2Q9NZC2 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.51□□□□□ -0.09
TREM2Q9NZC2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.5□□□□□ -0.09
TREM2Q9NZC2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms