Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 AC067930.6-201ENST00000623257 4947 ntBASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LIN7CQ9NUP9 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 AC126755.1-201ENST00000525846 6405 ntBASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 AC004870.1-201ENST00000315132 882 ntBASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 SAPCD2P3-201ENST00000455031 850 ntBASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 AC106795.1-205ENST00000512851 1056 ntBASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LIN7CQ9NUP9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 AL645728.1-201ENST00000366221 2101 ntBASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 AL662844.4-201ENST00000606367 2838 ntBASIC13.96□□□□□ -0.18
LIN7CQ9NUP9 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 ACTG1P4-201ENST00000425123 1122 ntBASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 FAAHP1-202ENST00000446499 1238 ntBASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.95□□□□□ -0.18
LIN7CQ9NUP9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms