Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 DGCR5-201ENST00000399539 862 ntBASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 AC004790.1-201ENST00000612686 536 ntBASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 LINC02012-201ENST00000608206 1725 ntBASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 AC006277.1-201ENST00000624348 1610 ntBASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.22■□□□□ 0.51
TRMT13Q9NUP7 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 HILS1-202ENST00000545329 423 ntBASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 IGHV3-72-202ENST00000621503 303 ntBASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRMT13Q9NUP7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRMT13Q9NUP7 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 INE1-201ENST00000456273 945 ntBASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 IGHV3-71-201ENST00000523324 359 ntBASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 AC010336.2-201ENST00000564226 506 ntBASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 HCG11-201ENST00000411553 5696 ntBASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.2■□□□□ 0.5
TRMT13Q9NUP7 CROCCP2-202ENST00000412962 2773 ntBASIC18.19■□□□□ 0.5
TRMT13Q9NUP7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRMT13Q9NUP7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRMT13Q9NUP7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms