Protein–RNA interactions for Protein: Q9HAZ1

CLK4, Dual specificity protein kinase CLK4, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4Q9HAZ1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 AC116353.5-201ENST00000638148 1699 ntBASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLK4Q9HAZ1 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 AC105339.3-201ENST00000560043 636 ntBASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 AC004817.3-201ENST00000602957 2129 ntBASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 FAM215A-202ENST00000632077 792 ntBASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CLK4Q9HAZ1 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 KRT18P27-201ENST00000427733 1299 ntBASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 RPS2P1-201ENST00000434010 821 ntBASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 AL121894.2-201ENST00000602977 491 ntBASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CLK4Q9HAZ1 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK4Q9HAZ1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CLK4Q9HAZ1 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
CLK4Q9HAZ1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK4Q9HAZ1 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.33■□□□□ 0.21
CLK4Q9HAZ1 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
CLK4Q9HAZ1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CLK4Q9HAZ1 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.33■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms