Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
PIF1Q9H611 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.06■□□□□ 0.16
PIF1Q9H611 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
PIF1Q9H611 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.06■□□□□ 0.16
PIF1Q9H611 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.06■□□□□ 0.16
PIF1Q9H611 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.06■□□□□ 0.16
PIF1Q9H611 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.06■□□□□ 0.16
PIF1Q9H611 PCED1CP-201ENST00000419887 785 ntBASIC16.06■□□□□ 0.16
PIF1Q9H611 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.06■□□□□ 0.16
PIF1Q9H611 AP002490.2-201ENST00000524791 560 ntBASIC16.06■□□□□ 0.16
PIF1Q9H611 AL121672.3-201ENST00000608644 468 ntBASIC16.06■□□□□ 0.16
PIF1Q9H611 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
PIF1Q9H611 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
PIF1Q9H611 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PIF1Q9H611 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PIF1Q9H611 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.05■□□□□ 0.16
PIF1Q9H611 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.05■□□□□ 0.16
PIF1Q9H611 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.05■□□□□ 0.16
PIF1Q9H611 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.05■□□□□ 0.16
PIF1Q9H611 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.05■□□□□ 0.16
PIF1Q9H611 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.05■□□□□ 0.16
PIF1Q9H611 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.05■□□□□ 0.16
PIF1Q9H611 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.05■□□□□ 0.16
PIF1Q9H611 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.05■□□□□ 0.16
PIF1Q9H611 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.05■□□□□ 0.16
PIF1Q9H611 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.05■□□□□ 0.16
PIF1Q9H611 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 AC126755.1-201ENST00000525846 6405 ntBASIC16.05■□□□□ 0.16
PIF1Q9H611 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PIF1Q9H611 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PIF1Q9H611 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PIF1Q9H611 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PIF1Q9H611 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PIF1Q9H611 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
PIF1Q9H611 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PIF1Q9H611 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PIF1Q9H611 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PIF1Q9H611 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PIF1Q9H611 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.04■□□□□ 0.16
PIF1Q9H611 IER3-202ENST00000376377 1350 ntBASIC16.04■□□□□ 0.16
PIF1Q9H611 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PIF1Q9H611 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PIF1Q9H611 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.04■□□□□ 0.16
PIF1Q9H611 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PIF1Q9H611 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PIF1Q9H611 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.04■□□□□ 0.16
PIF1Q9H611 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PIF1Q9H611 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PIF1Q9H611 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PIF1Q9H611 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.04■□□□□ 0.16
PIF1Q9H611 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.04■□□□□ 0.16
PIF1Q9H611 AC009533.2-201ENST00000543664 586 ntBASIC16.04■□□□□ 0.16
PIF1Q9H611 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.04■□□□□ 0.16
PIF1Q9H611 AD001527.2-201ENST00000622994 785 ntBASIC16.04■□□□□ 0.16
PIF1Q9H611 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.04■□□□□ 0.16
PIF1Q9H611 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
PIF1Q9H611 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms