Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 NKILA-202ENST00000614771 2598 ntBASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 AC092919.2-201ENST00000623631 1645 ntBASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 AC140658.5-201ENST00000438532 169 ntBASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 DNAJB3-202ENST00000449667 1266 ntBASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 AC087641.1-201ENST00000557561 1021 ntBASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 SNHG9-202ENST00000564014 471 ntBASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SSBP3Q9BWW4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 AC018695.7-201ENST00000624587 2492 ntBASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 AC254562.1-201ENST00000417586 456 ntBASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 AP001160.2-201ENST00000596071 487 ntBASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 AL596442.2-201ENST00000610240 980 ntBASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.97□□□□□ -0.17
SSBP3Q9BWW4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms