Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
NPAS1Q99742 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NPAS1Q99742 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
NPAS1Q99742 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS1Q99742 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS1Q99742 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS1Q99742 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
NPAS1Q99742 SNX33P1-201ENST00000592116 1762 ntBASIC15.27■□□□□ 0.04
NPAS1Q99742 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS1Q99742 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS1Q99742 AL136379.1-201ENST00000623471 2642 ntBASIC15.27■□□□□ 0.04
NPAS1Q99742 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS1Q99742 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS1Q99742 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS1Q99742 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.27■□□□□ 0.04
NPAS1Q99742 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
NPAS1Q99742 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.27■□□□□ 0.04
NPAS1Q99742 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
NPAS1Q99742 AL513480.1-201ENST00000451731 511 ntBASIC15.27■□□□□ 0.04
NPAS1Q99742 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.27■□□□□ 0.04
NPAS1Q99742 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
NPAS1Q99742 MIR4492-201ENST00000581627 80 ntBASIC15.27■□□□□ 0.04
NPAS1Q99742 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.27■□□□□ 0.04
NPAS1Q99742 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS1Q99742 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.27■□□□□ 0.03
NPAS1Q99742 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS1Q99742 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS1Q99742 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS1Q99742 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS1Q99742 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.27■□□□□ 0.03
NPAS1Q99742 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS1Q99742 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
NPAS1Q99742 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.03
NPAS1Q99742 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS1Q99742 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS1Q99742 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPAS1Q99742 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 AC025580.3-201ENST00000617932 1424 ntBASIC15.26■□□□□ 0.03
NPAS1Q99742 AC131009.4-201ENST00000624048 1740 ntBASIC15.26■□□□□ 0.03
NPAS1Q99742 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS1Q99742 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
NPAS1Q99742 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS1Q99742 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC15.26■□□□□ 0.03
NPAS1Q99742 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS1Q99742 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
NPAS1Q99742 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS1Q99742 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS1Q99742 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC15.26■□□□□ 0.03
NPAS1Q99742 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.26■□□□□ 0.03
NPAS1Q99742 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS1Q99742 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NPAS1Q99742 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS1Q99742 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS1Q99742 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.25■□□□□ 0.03
NPAS1Q99742 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPAS1Q99742 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS1Q99742 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS1Q99742 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPAS1Q99742 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS1Q99742 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS1Q99742 AC006277.1-201ENST00000624348 1610 ntBASIC15.25■□□□□ 0.03
NPAS1Q99742 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS1Q99742 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
NPAS1Q99742 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS1Q99742 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS1Q99742 BCAR1-209ENST00000546196 1340 ntBASIC15.25■□□□□ 0.03
NPAS1Q99742 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS1Q99742 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
NPAS1Q99742 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPAS1Q99742 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms