Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 RN7SL589P-201ENST00000481268 310 ntBASIC13.62□□□□□ -0.23
ZNF48Q96MX3 AC069335.1-201ENST00000489972 472 ntBASIC13.62□□□□□ -0.23
ZNF48Q96MX3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 AC005412.3-201ENST00000580309 715 ntBASIC13.62□□□□□ -0.23
ZNF48Q96MX3 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC13.62□□□□□ -0.23
ZNF48Q96MX3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 AC012569.1-201ENST00000591191 1524 ntBASIC13.61□□□□□ -0.23
ZNF48Q96MX3 RHBDF1P1-201ENST00000427504 1941 ntBASIC13.61□□□□□ -0.23
ZNF48Q96MX3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 AL035633.1-201ENST00000406139 838 ntBASIC13.61□□□□□ -0.23
ZNF48Q96MX3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 KRT18P32-201ENST00000424695 1287 ntBASIC13.61□□□□□ -0.23
ZNF48Q96MX3 SPCS2P4-201ENST00000436160 681 ntBASIC13.61□□□□□ -0.23
ZNF48Q96MX3 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 DUX4L27-201ENST00000554796 1261 ntBASIC13.61□□□□□ -0.23
ZNF48Q96MX3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 AL009183.1-201ENST00000603760 355 ntBASIC13.61□□□□□ -0.23
ZNF48Q96MX3 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ZNF48Q96MX3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ZNF48Q96MX3 AD000864.1-201ENST00000624076 2295 ntBASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms