Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
FGD4Q96M96 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
FGD4Q96M96 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC18.86■□□□□ 0.61
FGD4Q96M96 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.86■□□□□ 0.61
FGD4Q96M96 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.86■□□□□ 0.61
FGD4Q96M96 PRYP6-201ENST00000514804 343 ntBASIC18.86■□□□□ 0.61
FGD4Q96M96 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 AC013467.2-201ENST00000605472 835 ntBASIC18.86■□□□□ 0.61
FGD4Q96M96 AC012645.4-201ENST00000610691 1061 ntBASIC18.86■□□□□ 0.61
FGD4Q96M96 AL035252.4-201ENST00000624174 288 ntBASIC18.86■□□□□ 0.61
FGD4Q96M96 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
FGD4Q96M96 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
FGD4Q96M96 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.86■□□□□ 0.61
FGD4Q96M96 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
FGD4Q96M96 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
FGD4Q96M96 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
FGD4Q96M96 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
FGD4Q96M96 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.85■□□□□ 0.61
FGD4Q96M96 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
FGD4Q96M96 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.85■□□□□ 0.61
FGD4Q96M96 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.85■□□□□ 0.61
FGD4Q96M96 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.85■□□□□ 0.61
FGD4Q96M96 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.85■□□□□ 0.61
FGD4Q96M96 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.85■□□□□ 0.61
FGD4Q96M96 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.85■□□□□ 0.61
FGD4Q96M96 BANF1P1-201ENST00000553684 263 ntBASIC18.85■□□□□ 0.61
FGD4Q96M96 AC005225.4-201ENST00000557330 545 ntBASIC18.85■□□□□ 0.61
FGD4Q96M96 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.85■□□□□ 0.61
FGD4Q96M96 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
FGD4Q96M96 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
FGD4Q96M96 AC068880.1-201ENST00000507289 2297 ntBASIC18.85■□□□□ 0.61
FGD4Q96M96 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
FGD4Q96M96 AC006277.1-201ENST00000624348 1610 ntBASIC18.85■□□□□ 0.61
FGD4Q96M96 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
FGD4Q96M96 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.85■□□□□ 0.61
FGD4Q96M96 AC012313.1-201ENST00000593393 3059 ntBASIC18.85■□□□□ 0.61
FGD4Q96M96 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC18.84■□□□□ 0.61
FGD4Q96M96 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
FGD4Q96M96 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 AC073439.1-201ENST00000624121 1774 ntBASIC18.84■□□□□ 0.61
FGD4Q96M96 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.84■□□□□ 0.61
FGD4Q96M96 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
FGD4Q96M96 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.84■□□□□ 0.61
FGD4Q96M96 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.84■□□□□ 0.61
FGD4Q96M96 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.84■□□□□ 0.61
FGD4Q96M96 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.84■□□□□ 0.61
FGD4Q96M96 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.84■□□□□ 0.61
FGD4Q96M96 AP005018.1-201ENST00000525475 301 ntBASIC18.84■□□□□ 0.61
FGD4Q96M96 AC027369.6-201ENST00000525520 931 ntBASIC18.84■□□□□ 0.61
FGD4Q96M96 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.84■□□□□ 0.61
FGD4Q96M96 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.84■□□□□ 0.61
FGD4Q96M96 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.84■□□□□ 0.61
FGD4Q96M96 AC003101.2-201ENST00000612557 442 ntBASIC18.84■□□□□ 0.61
FGD4Q96M96 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.84■□□□□ 0.61
FGD4Q96M96 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
FGD4Q96M96 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
FGD4Q96M96 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
FGD4Q96M96 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms