Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF4Q96M43 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF4Q96M43 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
NBPF4Q96M43 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF4Q96M43 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC21.82■■□□□ 1.08
NBPF4Q96M43 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC21.82■■□□□ 1.08
NBPF4Q96M43 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.82■■□□□ 1.08
NBPF4Q96M43 ZNF890P-202ENST00000530367 1156 ntBASIC21.82■■□□□ 1.08
NBPF4Q96M43 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC21.82■■□□□ 1.08
NBPF4Q96M43 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF4Q96M43 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
NBPF4Q96M43 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC21.82■■□□□ 1.08
NBPF4Q96M43 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.82■■□□□ 1.08
NBPF4Q96M43 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 OR8S1-201ENST00000310194 1080 ntBASIC21.81■■□□□ 1.08
NBPF4Q96M43 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
NBPF4Q96M43 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NBPF4Q96M43 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF4Q96M43 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 AC135586.1-201ENST00000539323 574 ntBASIC21.81■■□□□ 1.08
NBPF4Q96M43 AC010336.2-201ENST00000564226 506 ntBASIC21.81■■□□□ 1.08
NBPF4Q96M43 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC21.81■■□□□ 1.08
NBPF4Q96M43 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC21.81■■□□□ 1.08
NBPF4Q96M43 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.81■■□□□ 1.08
NBPF4Q96M43 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
NBPF4Q96M43 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
NBPF4Q96M43 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
NBPF4Q96M43 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 NAA50-208ENST00000497255 789 ntTSL 5 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 NOP2-220ENST00000545915 630 ntTSL 2 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 AL139011.1-202ENST00000642063 584 ntBASIC21.8■■□□□ 1.08
NBPF4Q96M43 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
NBPF4Q96M43 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
NBPF4Q96M43 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 SPDYE18-201ENST00000510091 1050 ntBASIC21.79■■□□□ 1.08
NBPF4Q96M43 AC104794.3-201ENST00000566840 1248 ntBASIC21.79■■□□□ 1.08
NBPF4Q96M43 AC061975.2-201ENST00000581722 295 ntBASIC21.79■■□□□ 1.08
NBPF4Q96M43 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 AL589702.1-201ENST00000641229 1509 ntBASIC21.79■■□□□ 1.08
NBPF4Q96M43 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 CU639417.3-201ENST00000624240 1404 ntBASIC21.79■■□□□ 1.08
NBPF4Q96M43 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
NBPF4Q96M43 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.79■■□□□ 1.08
NBPF4Q96M43 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms