Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 PC-214ENST00000628663 1470 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.96■□□□□ 0.79
CHMP4CQ96CF2 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 MIR3687-2-201ENST00000577708 61 ntBASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 MIR3687-1-201ENST00000614492 61 ntBASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CHMP4CQ96CF2 AC092919.2-201ENST00000623631 1645 ntBASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 PAWRP1-201ENST00000451083 565 ntBASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 KRT19P2-202ENST00000557173 1012 ntBASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 AL596442.2-201ENST00000610240 980 ntBASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CHMP4CQ96CF2 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 KRT8P49-201ENST00000604166 1432 ntBASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 AL118508.1-201ENST00000613502 2345 ntBASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 AC004832.2-201ENST00000426397 482 ntBASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 AL513480.1-201ENST00000451731 511 ntBASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 HLA-J-202ENST00000469281 1241 ntBASIC19.93■□□□□ 0.78
CHMP4CQ96CF2 CXCL1P1-201ENST00000502804 216 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms