Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.92■□□□□ 0.62
SMARCE1Q969G3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 ARMC10P1-201ENST00000313754 855 ntBASIC18.91■□□□□ 0.62
SMARCE1Q969G3 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 AL732292.2-201ENST00000609649 430 ntBASIC18.91■□□□□ 0.62
SMARCE1Q969G3 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 AL139288.1-201ENST00000623748 933 ntBASIC18.91■□□□□ 0.62
SMARCE1Q969G3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.91■□□□□ 0.62
SMARCE1Q969G3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 AL513523.2-202ENST00000427283 2040 ntBASIC18.91■□□□□ 0.62
SMARCE1Q969G3 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMARCE1Q969G3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 RBM17P3-201ENST00000417687 1192 ntBASIC18.9■□□□□ 0.62
SMARCE1Q969G3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 AL139011.1-202ENST00000642063 584 ntBASIC18.9■□□□□ 0.62
SMARCE1Q969G3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.9■□□□□ 0.62
SMARCE1Q969G3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCE1Q969G3 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC18.89■□□□□ 0.62
SMARCE1Q969G3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMARCE1Q969G3 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
SMARCE1Q969G3 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms