Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 FAM197Y3-203ENST00000618346 717 ntBASIC17.97■□□□□ 0.47
SEMA4DQ92854 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 AL031055.1-201ENST00000606362 631 ntBASIC17.96■□□□□ 0.47
SEMA4DQ92854 AC007064.4-201ENST00000637740 555 ntBASIC17.96■□□□□ 0.47
SEMA4DQ92854 ME2P1-201ENST00000426028 1970 ntBASIC17.96■□□□□ 0.47
SEMA4DQ92854 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.96■□□□□ 0.47
SEMA4DQ92854 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
SEMA4DQ92854 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
SEMA4DQ92854 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SEMA4DQ92854 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
SEMA4DQ92854 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 GPAA1P2-202ENST00000606848 1787 ntBASIC17.95■□□□□ 0.46
SEMA4DQ92854 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.95■□□□□ 0.46
SEMA4DQ92854 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 AL591424.1-201ENST00000442569 1213 ntBASIC17.95■□□□□ 0.46
SEMA4DQ92854 RNA5SP416-201ENST00000516838 111 ntBASIC17.95■□□□□ 0.46
SEMA4DQ92854 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.95■□□□□ 0.46
SEMA4DQ92854 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SEMA4DQ92854 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 AC006449.5-201ENST00000610658 2098 ntBASIC17.94■□□□□ 0.46
SEMA4DQ92854 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SEMA4DQ92854 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 POLD2P1-201ENST00000511220 997 ntBASIC17.94■□□□□ 0.46
SEMA4DQ92854 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SEMA4DQ92854 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms