Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 MEIS3P1-201ENST00000495167 958 ntBASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 AC135586.1-201ENST00000539323 574 ntBASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 CDK4-206ENST00000549606 558 ntTSL 2 BASIC25.63■■□□□ 1.69
CASKIN1Q8WXD9 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 AP001094.4-201ENST00000579008 2176 ntBASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 AC005915.1-201ENST00000624912 2018 ntBASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 EDF1-203ENST00000371649 790 ntTSL 2 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 AC044860.1-202ENST00000559481 777 ntBASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 TP53TG3HP-202ENST00000569755 579 ntBASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
CASKIN1Q8WXD9 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 AC105020.1-201ENST00000435356 2205 ntBASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 HLA-A-202ENST00000376806 1854 ntBASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 NME2P1-201ENST00000426182 414 ntBASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 SERBP1P3-201ENST00000459980 809 ntBASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 AC026979.3-201ENST00000607315 403 ntBASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CASKIN1Q8WXD9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 AC027307.3-201ENST00000594262 1100 ntBASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC25.6■■□□□ 1.69
CASKIN1Q8WXD9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 DFFBP1-201ENST00000433250 979 ntBASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 RAB35-202ENST00000534951 939 ntTSL 2 BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 AL033527.5-202ENST00000641632 1098 ntBASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC25.59■■□□□ 1.69
CASKIN1Q8WXD9 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms